RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MXRA8Q9BRK3 442 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 CRISPLD2Q9H0B8 497 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 FAM13BQ9NYF5 915 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 RTEL1Q9NZ71 1219 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 DDX41Q9UJV9 622 aaKnown RBP9.26□□□□□ -0.93
CHD6-201ENST00000309279 ACAD8Q9UKU7 415 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 Q9Y3F1 56 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 IGLV3-22A0A075B6J6 115 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 A6NJY4 79 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 FAM86B1E9PN63 330 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 TBX3O15119 743 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 NKRFO15226 690 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD6-201ENST00000309279 FIBPO43427 364 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 ARIH2O95376 493 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 MYCP01106 439 aaPredicted RBP9.25□□□□□ -0.93
CHD6-201ENST00000309279 FAM86B2P0C5J1 330 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 RARBP10826 455 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 SMPD1P17405 629 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 SYT1P21579 422 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 SP2Q02086 613 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 TNFAIP2Q03169 654 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 CAMK2BQ13554 666 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 INF2Q27J81 1249 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 TMEM63BQ5T3F8 832 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 MOXD1Q6UVY6 613 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 SEPT14Q6ZU15 432 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 PIK3AP1Q6ZUJ8 805 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 NLRX1Q86UT6 975 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 NOSTRINQ8IVI9 506 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 LMNTD2Q8IXW0 634 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 U2AF1L4Q8WU68 220 aaKnown RBP9.25□□□□□ -0.93
CHD6-201ENST00000309279 GOLGA1Q92805 767 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 GPRASP2Q96D09 838 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 ERP27Q96DN0 273 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 CDHR1Q96JP9 859 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 MBOAT7Q96N66 472 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 DEFB118Q96PH6 123 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 TMEM106CQ9BVX2 250 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 OGDHLQ9ULD0 1010 aa9.25□□□□□ -0.93
CHD6-201ENST00000309279 POTEFA5A3E0 1075 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 KIF28PB7ZC32 967 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 H3BQV1 296 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 TXNP10599 105 aaKnown RBP9.24□□□□□ -0.93
CHD6-201ENST00000309279 DNAJA1P31689 397 aaKnown RBP9.24□□□□□ -0.93
CHD6-201ENST00000309279 CD151P48509 253 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 MTMR1Q13613 665 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 MFSD10Q14728 455 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 TMEM95Q3KNT9 176 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 IFFO2Q5TF58 517 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 PPP4R3AQ6IN85 833 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 PDXDC1Q6P996 788 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 NEK8Q86SG6 692 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 EMID1Q96A84 441 aaPredicted RBP9.24□□□□□ -0.93
CHD6-201ENST00000309279 LENG9Q96B70 501 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 UPF3AQ9H1J1 476 aaKnown RBP9.24□□□□□ -0.93
CHD6-201ENST00000309279 KCNH7Q9NS40 1196 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 POLG2Q9UHN1 485 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 DOCK5Q9H7D0 1870 aa9.24□□□□□ -0.93
CHD6-201ENST00000309279 CCDC163A0A0D9SF12 145 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 FAM205CA6NFA0 338 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 CTAGE5O15320 804 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 STX6O43752 255 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 ATP9AO75110 1047 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 ADAMTS4O75173 837 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 FECHP22830 423 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 ZNF76P36508 570 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 TRAPPC10P48553 1259 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 GJA9P57773 515 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 WASHC5Q12768 1159 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 CBLBQ13191 982 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 LY6KQ17RY6 165 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 Q4G0T1 1027 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 TMEM164Q5U3C3 297 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 NYAP1Q6ZVC0 841 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 WDR75Q8IWA0 830 aaKnown RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 CHCHD4Q8N4Q1 142 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 KLHDC9Q8NEP7 349 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 PAIP2Q9BPZ3 127 aaKnown RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 XPNPEP3Q9NQH7 507 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 VGLL3A8MV65 326 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 COQ9O75208 318 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 ARP10275 920 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 GCFC2P16383 781 aaKnown RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 KCNA2P16389 499 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 UBA1P22314 1058 aaKnown RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 CST5P28325 142 aaPredicted RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 MNX1P50219 401 aaPredicted RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 ARHGAP1Q07960 439 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 NEDD9Q14511 834 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 CELF3Q5SZQ8 465 aaKnown RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 C10orf62Q5T681 223 aaPredicted RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 ANO1Q5XXA6 986 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 CCDC70Q6NSX1 233 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 TLK2Q86UE8 772 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 TTC30AQ86WT1 665 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 PLA2G4DQ86XP0 818 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 ARRDC4Q8NCT1 418 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 GIMAP8Q8ND71 665 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms