RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.35□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 TNRC18O15417 2968 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 POTEMA6NI47 508 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 EML1O00423 815 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 RPLP2P05387 115 aaKnown RBP12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 CYP2C18P33260 490 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 TECP42680 631 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 QARSP47897 775 aaKnown RBP12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 TOB1P50616 345 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 CCL23P55773 120 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 RESTQ13127 1097 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 PTGDRQ13258 359 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 UGCGQ16739 394 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 HAUS3Q68CZ6 603 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 SERINC5Q86VE9 423 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 LXNQ9BS40 222 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
CSPG4P1Y-201ENST00000306641 M0QZ92 97 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 CAND2O75155 1236 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 RFC2P35250 354 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 THPOP40225 353 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 PRPHP41219 470 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 CYP4A11Q02928 519 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 RBL2Q08999 1139 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 HIC1Q14526 733 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 XKR3Q5GH77 459 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 DTHD1Q6ZMT9 781 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 LRRC8DQ7L1W4 858 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 UMODL1Q5DID0 1318 aa12.33□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MICAL3Q7RTP6 2002 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MAGEB2O15479 319 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ZNF862O60290 1169 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 CKBP12277 381 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 CSF2RAP15509 400 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 SELPP16109 830 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ATP4AP20648 1035 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ITGB8P26012 769 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ANP32AP39687 249 aaKnown RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ADAM17P78536 824 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ATP2C1P98194 919 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 TBC1D8BQ0IIM8 1120 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 CTTNQ14247 550 aaKnown RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MTERF2Q49AM1 385 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 FOXD4L5Q5VV16 416 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 PSRC1Q6PGN9 363 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MTHFD1LQ6UB35 978 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 OTUD6AQ7L8S5 288 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 TPH2Q8IWU9 490 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 C4orf19Q8IY42 314 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 DHX38Q92620 1227 aaKnown RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 SCLYQ96I15 445 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 CTAGE1Q96RT6 745 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 GDF15Q99988 308 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 WNT8AQ9H1J5 351 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 TCHHQ07283 1943 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MYH11P35749 1972 aa12.32□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 F13A1P00488 732 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 PFKMP08237 780 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 CTSHP09668 335 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 IQCF3P0C7M6 154 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 KLRC1P26715 233 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 TMOD1P28289 359 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 BMP8BP34820 402 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 SF3A1Q15459 793 aaKnown RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ARL6IP4Q66PJ3 421 aaKnown RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 METTL13Q8N6R0 699 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 DNAJB3Q8WWF6 145 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 WNT8BQ93098 351 aa12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 ZNF396Q96N95 335 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 JPH2Q9BR39 696 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 FAM49AQ9H0Q0 323 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
CSPG4P1Y-201ENST00000306641 TUFT1Q9NNX1 390 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms