RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 KLRC3Q07444 240 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MXD4Q14582 209 aaPredicted RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MAPK6Q16659 721 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 SCYL2Q6P3W7 929 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 FBXO33Q7Z6M2 555 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NAPGQ99747 312 aaPredicted RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 DNAJC25Q9H1X3 360 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 ALDH8A1Q9H2A2 487 aaPredicted RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 TMEM51Q9NW97 253 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 VPS18Q9P253 973 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 RNF8O76064 485 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 ASPHQ12797 758 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 ZNF579Q8NAF0 562 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 RDM1Q8NG50 284 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 A0A1B0GUA9 196 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 TMEM247A6NEH6 219 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 RRN3P2A6NIE6 340 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 CHRNA5P30532 468 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 BZW1Q7L1Q6 419 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 N4BP2L2Q92802 583 aaPredicted RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 OTUD5Q96G74 571 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 ATP6V0A4Q9HBG4 840 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 RNF146Q9NTX7 359 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 CPSF2Q9P2I0 782 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 HNRNPCL2B2RXH8 293 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 HNRNPCL1O60812 293 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 NOP14P78316 857 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 GRM4Q14833 912 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 PEX26Q7Z412 305 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 SMAP1Q8IYB5 467 aaPredicted RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 NME8Q8N427 588 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 NSUN4Q96CB9 384 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 VPS37BQ9H9H4 285 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 AAASQ9NRG9 546 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 KARSQ15046 597 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 OTUD7AQ8TE49 926 aaPredicted RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 ZC3H15Q8WU90 426 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 TYW1Q9NV66 732 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 NYAP2Q9P242 653 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 CXCL11O14625 94 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 ARHGAP6O43182 974 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 KPNA2P52292 529 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 SLC39A14Q15043 492 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 IER5Q5VY09 327 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 SGMS1Q86VZ5 419 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 IGSF22Q8N9C0 903 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 GADD45GIP1Q8TAE8 222 aaPredicted RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 RHOXF2BP0C7M4 288 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 SRGNP10124 158 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 HPDP32754 393 aaPredicted RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 RGS2P41220 211 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 PIK3CAP42336 1068 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 TMTC3Q6ZXV5 915 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 TBCKQ8TEA7 893 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 CEP95Q96GE4 821 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 RHOXF2Q9BQY4 288 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 SHPRHQ149N8 1683 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 TXNDC9O14530 226 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 DYNLL1P63167 89 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 ITPK1Q13572 414 aa9□□□□□ -0.97
PCDHB1-201ENST00000306549 INTS5Q6P9B9 1019 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 TDRD7Q8NHU6 1098 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 SECISBP2LQ93073 1101 aaKnown RBP9□□□□□ -0.97
PCDHB1-201ENST00000306549 MSCO60682 206 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 MFAP3P55082 362 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 HUNKP57058 714 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 KLHL30Q0D2K2 578 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 TBCCQ15814 346 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PFKFB3Q16875 520 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 CFAP221Q4G0U5 840 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 SCFD2Q8WU76 684 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 SEPT8Q92599 483 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 OSBP2Q969R2 916 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 DENND3A2RUS2 1198 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PAK2Q13177 524 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 ATP6V1E2Q96A05 226 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 EHD4Q9H223 541 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 RPAP3Q9H6T3 665 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 IFNKQ9P0W0 207 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 NKRFO15226 690 aaKnown RBP eCLIP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 ASAP2O43150 1006 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 RNF40O75150 1001 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 CYP21A2P08686 494 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 DPEP1P16444 411 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PRDX5P30044 214 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 ADD1P35611 737 aaKnown RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 MAPK8IP2Q13387 824 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 SCARF1Q14162 830 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 RPS6KA1Q15418 735 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 TTC31Q49AM3 519 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 ACBD5Q5T8D3 534 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 C16orf86Q6ZW13 317 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 CCDC186Q7Z3E2 898 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 SMARCAD1Q9H4L7 1026 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 KCNJ14Q9UNX9 436 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 SMIM24O75264 130 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 SNRPFP62306 86 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms