RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 STRN3Q13033 797 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 TRIP13Q15645 432 aaPredicted RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 SGO2Q562F6 1265 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 XKR9Q5GH70 373 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 PDXDC2PQ6P474 469 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 KLHL29Q96CT2 875 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 IWS1Q96ST2 819 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 NOC2LQ9Y3T9 749 aaKnown RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 DLG5Q8TDM6 1919 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 TCRBV5S4A2TA0A5A2 114 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 MMEP08473 750 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 MDM2Q00987 491 aaPredicted RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 NEDD9Q14511 834 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 CYP4F22Q6NT55 531 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 TAB3Q8N5C8 712 aaPredicted RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 ZIM3Q96PE6 472 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 PSMD1Q99460 953 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 MAK16Q9BXY0 300 aaKnown RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 DMGDHQ9UI17 866 aaKnown RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 GRID2IPA4D2P6 1211 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 MYO1FO00160 1098 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 ECEL1O95672 775 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 HOXA7P31268 230 aaPredicted RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 HERVK_113P62684 666 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 SLC18A3Q16572 532 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 KAZNQ674X7 775 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 TBC1D1Q86TI0 1168 aaPredicted RBP14.4□□□□□ -0.1
DDX54-201ENST00000306014 NEDD1Q8NHV4 660 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 GRK7Q8WTQ7 553 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.4□□□□□ -0.18e-7■■□□□ 11.5
DDX54-201ENST00000306014 ANAPC4Q9UJX5 808 aa14.4□□□□□ -0.1
DDX54-201ENST00000306014 POC1B-GALNT4F8VUJ3 575 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 STXBP3O00186 592 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 ZBTB5O15062 677 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 ACSL3O95573 720 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 ACTN3Q08043 901 aaPredicted RBP14.39□□□□□ -0.11
DDX54-201ENST00000306014 PHLDB2Q86SQ0 1253 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX54-201ENST00000306014 NPHP3-ACAD11A0A0J9YXS1 232 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 SSU72P8A0A1W2PR75 194 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 CD19P15391 556 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 GUCY2CP25092 1073 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 PPP2R2AP63151 447 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 EZH2Q15910 746 aaKnown RBP14.39□□□□□ -0.11
DDX54-201ENST00000306014 KNOP1Q1ED39 458 aaKnown RBP14.39□□□□□ -0.11
DDX54-201ENST00000306014 ADGRA1Q86SQ6 560 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 VPS52Q8N1B4 723 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 ZNF577Q9BSK1 485 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 C1orf112Q9NSG2 853 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 PLAGL2Q9UPG8 496 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 ZNF148Q9UQR1 794 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 TESPA1A2RU30 521 aaPredicted RBP14.39□□□□□ -0.11
DDX54-201ENST00000306014 SART1O43290 800 aaKnown RBP14.39□□□□□ -0.11
DDX54-201ENST00000306014 PMS1P54277 932 aaKnown RBP14.39□□□□□ -0.11
DDX54-201ENST00000306014 PAF1Q8N7H5 531 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 OR2W6PQ8NHA6 318 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 ERGIC2Q96RQ1 377 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 SPZ1Q9BXG8 430 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
DDX54-201ENST00000306014 RAB21Q9UL25 225 aa14.39□□□□□ -0.11
DDX54-201ENST00000306014 FAM196BA6NMK8 535 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 CHUKO15111 745 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 SEC24CP53992 1094 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 ANKRD20A3Q5VUR7 823 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 TTI2Q6NXR4 508 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 GLYCTKQ8IVS8 523 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 NBPF3Q9H094 633 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 CD209Q9NNX6 404 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
DDX54-201ENST00000306014 ACTN1P12814 892 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 ALAS1P13196 640 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 KLRC1P26715 233 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 CACNB3P54284 484 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 CORO7P57737 925 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 TSNAXIP1Q2TAA8 658 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 MMGT1Q8N4V1 131 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 GDAP1Q8TB36 358 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 HOOK2Q96ED9 719 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
DDX54-201ENST00000306014 FGFR2P21802 821 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 MAPK4P31152 587 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 SBK1Q52WX2 424 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
DDX54-201ENST00000306014 CLEC10AQ8IUN9 316 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 NACC1Q96RE7 527 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 CCT8L2Q96SF2 557 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 HSPA6P17066 643 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
DDX54-201ENST00000306014 NSFP46459 744 aaKnown RBP14.38□□□□□ -0.11
DDX54-201ENST00000306014 TRPC3Q13507 836 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 NAALADL2Q58DX5 795 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 NUGGCQ68CJ6 796 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 NT5C1BQ96P26 610 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 NARFQ9UHQ1 456 aa14.38□□□□□ -0.11
DDX54-201ENST00000306014 CAMTA2O94983 1202 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 MFAP3P55082 362 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 SLMAPQ14BN4 828 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms