RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 F2P00734 622 aa30.36■■■□□ 2.45
HDAC3-201ENST00000305264 GJB1P08034 283 aa30.36■■■□□ 2.45
HDAC3-201ENST00000305264 LIG1P18858 919 aa30.36■■■□□ 2.45
HDAC3-201ENST00000305264 CXCL17Q6UXB2 119 aa30.36■■■□□ 2.45
HDAC3-201ENST00000305264 C4orf19Q8IY42 314 aa30.36■■■□□ 2.45
HDAC3-201ENST00000305264 NT5C3AQ9H0P0 336 aa30.36■■■□□ 2.45
HDAC3-201ENST00000305264 TMEM150BA6NC51 233 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 H3BRB1 525 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 POLR2DO15514 142 aaKnown RBP30.35■■■□□ 2.45
HDAC3-201ENST00000305264 ASGR1P07306 291 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 PIGOQ8TEQ8 1089 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 TUT1Q9H6E5 874 aaKnown RBP30.35■■■□□ 2.45
HDAC3-201ENST00000305264 ERAP1Q9NZ08 941 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 SCN10AQ9Y5Y9 1956 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 ZEB2O60315 1214 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 STBD1O95210 358 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 LYPLA2O95372 231 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 MUTP22033 750 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 NAALADL2Q58DX5 795 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 CKAP2LQ8IYA6 745 aa30.35■■■□□ 2.45
HDAC3-201ENST00000305264 PCSK9Q8NBP7 692 aaKnown RBP30.35■■■□□ 2.45
HDAC3-201ENST00000305264 ZNF215Q9UL58 517 aaPredicted RBP30.35■■■□□ 2.45
HDAC3-201ENST00000305264 ARID2Q68CP9 1835 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 DDX11L8A8MPP1 907 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 E9PMD0 336 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 E2F4Q16254 413 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 RRAGBQ5VZM2 374 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 CCDC73Q6ZRK6 1079 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 ARRDC4Q8NCT1 418 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 DHX58Q96C10 678 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 CRISPLD2Q9H0B8 497 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 RNPEPQ9H4A4 650 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 SGPL1O95470 568 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 OATP04181 439 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 YWHABP31946 246 aaKnown RBP30.34■■■□□ 2.45
HDAC3-201ENST00000305264 SYKP43405 635 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 PLCB4Q15147 1175 aa30.34■■■□□ 2.45
HDAC3-201ENST00000305264 KPNA6O60684 536 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 DKC1O60832 514 aaKnown RBP eCLIP30.33■■■□□ 2.45
HDAC3-201ENST00000305264 STAT6P42226 847 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 SLC26A2P50443 739 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 FAM160A1Q05DH4 1040 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 SNW1Q13573 536 aaKnown RBP30.33■■■□□ 2.45
HDAC3-201ENST00000305264 ANO5Q75V66 913 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 FMR1NBQ8N0W7 255 aaPredicted RBP30.33■■■□□ 2.45
HDAC3-201ENST00000305264 ENGASEQ8NFI3 743 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 BLOC1S4Q9NUP1 217 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 LOXHD1Q8IVV2 1947 aa30.33■■■□□ 2.45
HDAC3-201ENST00000305264 NR1I2O75469 434 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 ACLYP53396 1101 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 PLA2G4FQ68DD2 849 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 ATP8B4Q8TF62 1192 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 PPP1R13LQ8WUF5 828 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 NACC1Q96RE7 527 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 SH2D3AQ9BRG2 576 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 MTG1Q9BT17 334 aaPredicted RBP30.32■■■□□ 2.44
HDAC3-201ENST00000305264 SEPT9Q9UHD8 586 aaPredicted RBP30.32■■■□□ 2.44
HDAC3-201ENST00000305264 CHMP4BP1P59074 171 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 KIAA0753Q2KHM9 967 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 XKR3Q5GH77 459 aa30.32■■■□□ 2.44
HDAC3-201ENST00000305264 COL13A1Q5TAT6 717 aaPredicted RBP30.32■■■□□ 2.44
HDAC3-201ENST00000305264 GJA8P48165 433 aa30.31■■■□□ 2.44
HDAC3-201ENST00000305264 MFSD10Q14728 455 aa30.31■■■□□ 2.44
HDAC3-201ENST00000305264 GPT2Q8TD30 523 aa30.31■■■□□ 2.44
HDAC3-201ENST00000305264 TSEN34Q9BSV6 310 aaKnown RBP30.31■■■□□ 2.44
HDAC3-201ENST00000305264 DNM3Q9UQ16 869 aa30.31■■■□□ 2.44
HDAC3-201ENST00000305264 TRPC6Q9Y210 931 aa30.31■■■□□ 2.44
HDAC3-201ENST00000305264 KBTBD13C9JR72 458 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 HAS3O00219 553 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 DNM1LO00429 736 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 PSEN2P49810 448 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 IQUBQ8NA54 791 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 FAM167AQ96KS9 214 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 MOXD2PA6NHM9 499 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 ZNF202O95125 648 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 TFRCP02786 760 aaKnown RBP30.3■■■□□ 2.44
HDAC3-201ENST00000305264 RAD54LQ92698 747 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 BHMT2Q9H2M3 363 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 STK17AQ9UEE5 414 aa30.3■■■□□ 2.44
HDAC3-201ENST00000305264 ACTN4O43707 911 aaKnown RBP30.29■■■□□ 2.44
HDAC3-201ENST00000305264 NPEPPSP55786 919 aa30.29■■■□□ 2.44
HDAC3-201ENST00000305264 NFKBIBQ15653 356 aa30.29■■■□□ 2.44
HDAC3-201ENST00000305264 LONRF3Q496Y0 759 aa30.29■■■□□ 2.44
HDAC3-201ENST00000305264 BBXQ8WY36 941 aaPredicted RBP30.29■■■□□ 2.44
HDAC3-201ENST00000305264 KATNAL1Q9BW62 490 aa30.29■■■□□ 2.44
HDAC3-201ENST00000305264 SERTAD1Q9UHV2 236 aa30.29■■■□□ 2.44
HDAC3-201ENST00000305264 LARP4BQ92615 738 aaKnown RBP30.28■■■□□ 2.44
HDAC3-201ENST00000305264 TMEM106CQ9BVX2 250 aa30.28■■■□□ 2.44
HDAC3-201ENST00000305264 PHF24Q9UPV7 400 aa30.28■■■□□ 2.44
HDAC3-201ENST00000305264 EYA4O95677 639 aa30.28■■■□□ 2.44
HDAC3-201ENST00000305264 RARRES1P49788 294 aa30.28■■■□□ 2.44
HDAC3-201ENST00000305264 MNX1P50219 401 aaPredicted RBP30.28■■■□□ 2.44
HDAC3-201ENST00000305264 MCM6Q14566 821 aa30.28■■■□□ 2.44
HDAC3-201ENST00000305264 KCTD17Q8N5Z5 321 aa30.28■■■□□ 2.44
HDAC3-201ENST00000305264 PYM1Q9BRP8 204 aaKnown RBP30.28■■■□□ 2.44
HDAC3-201ENST00000305264 DACT1Q9NYF0 836 aa30.28■■■□□ 2.44
HDAC3-201ENST00000305264 DBR1Q9UK59 544 aaKnown RBP30.28■■■□□ 2.44
HDAC3-201ENST00000305264 A0A1W2PQ45 241 aaPredicted RBP30.27■■■□□ 2.44
HDAC3-201ENST00000305264 A0A1W2PQY0 241 aa30.27■■■□□ 2.44
HDAC3-201ENST00000305264 NRBP2Q9NSY0 501 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms