RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 IGFBP4P22692 258 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 CDR2Q01850 454 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 KLRC3Q07444 240 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 FOXP4Q8IVH2 680 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-201ENST00000303354 TMEM47Q9BQJ4 181 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 TMEM39BQ9GZU3 492 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 NLRP1Q9C000 1473 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 SAMD9Q5K651 1589 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 GNGT2O14610 69 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 LONP1P36776 959 aaKnown RBP8.42□□□□□ -1.06
SCN9A-201ENST00000303354 NLRP11P59045 1033 aaKnown RBP8.42□□□□□ -1.06
SCN9A-201ENST00000303354 CC2D1AQ6P1N0 951 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-201ENST00000303354 TBC1D10CQ8IV04 446 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 IFT122Q9HBG6 1241 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 KLK14Q9P0G3 267 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 ATP11BQ9Y2G3 1177 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 AMHR2Q16671 573 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 C9orf131Q5VYM1 1079 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 TRIM68Q6AZZ1 485 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 WDR11Q9BZH6 1224 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 RSPH10B2B2RC85 870 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 INHBAP08476 426 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 RSPH10BP0C881 870 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 DNAJB2P25686 324 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 PSMA2P25787 234 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 GARSP41250 739 aaKnown RBP8.42□□□□□ -1.06
SCN9A-201ENST00000303354 RGS7P49802 495 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 TSPY1Q01534 308 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 GUCY2DQ02846 1103 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 ZNF746Q6NUN9 644 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-201ENST00000303354 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
SCN9A-201ENST00000303354 E2F8A0AVK6 867 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 HUS1O60921 280 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SOX11P35716 441 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 MGAT5BQ3V5L5 792 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 LCA5Q86VQ0 697 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 HPS3Q969F9 1004 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 FEM1BQ9UK73 627 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POTEB3A0JP26 581 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POTECB2RU33 542 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 AP1B1Q10567 949 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SEZ6Q53EL9 994 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POTEBQ6S5H4 581 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 CEP120Q8N960 986 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 OR8K1Q8NGG5 319 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PKNOX2Q96KN3 472 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 M0QYV0 167 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SH2B2O14492 632 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 ZKSCAN8Q15776 578 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SPOPLQ6IQ16 392 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 EXOC8Q8IYI6 725 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PPFIBP2Q8ND30 876 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PBXIP1Q96AQ6 731 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SH3KBP1Q96B97 665 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 MTMR6Q9Y217 621 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 A8MXQ7 604 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PFDN6O15212 129 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 CFLARO15519 480 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PRPF4O43172 522 aaKnown RBP eCLIP8.41□□□□□ -1.066e-9■□□□□ 11.3
SCN9A-201ENST00000303354 SGO2Q562F6 1265 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 CFAP61Q8NHU2 1237 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PLEKHF1Q96S99 279 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 CPA4Q9UI42 421 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POTEFA5A3E0 1075 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SPTLC1O15269 473 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 GPC4O75487 556 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 H2AFZP0C0S5 128 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POTEIP0CG38 1075 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 NCF2P19878 526 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PHBP35232 272 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POTEGQ6S5H5 508 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POTEEQ6S8J3 1075 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PRR23CQ6ZRP0 262 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 H2AFVQ71UI9 128 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 POLR3FQ9H1D9 316 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SAR1BQ9Y6B6 198 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 TCEA2Q15560 299 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 MAPK6Q16659 721 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 TAS2R42Q7RTR8 314 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 INTUQ9ULD6 942 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 SLC4A7Q9Y6M7 1214 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 ATP8B3O60423 1300 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
SCN9A-201ENST00000303354 COG4Q9H9E3 785 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 NDFIP2Q9NV92 336 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PLTPP55058 493 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 ARMCX2Q7L311 632 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 FAF2Q96CS3 445 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 TTC7AQ9ULT0 858 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-201ENST00000303354 PCDHA5Q9Y5H7 936 aa8.41□□□□□ -1.06
SCN9A-201ENST00000303354 IQCA1LA6NCM1 817 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 ATL3Q6DD88 541 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 FRA10AC1Q70Z53 315 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 AGR3Q8TD06 166 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 P2RX5Q93086 422 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 APOL5Q9BWW9 433 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 LMBRD1Q9NUN5 540 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 CPDO75976 1380 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 MAST1Q9Y2H9 1570 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms