RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 PSMC5P62195 406 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 IRX3P78415 501 aaPredicted RBP11.71□□□□□ -0.53
CLP1-201ENST00000302731 NFIL3Q16649 462 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 GNPTABQ3T906 1256 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 CEP135Q66GS9 1140 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 GADL1Q6ZQY3 521 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 STXBP4Q6ZWJ1 553 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 TMTC1Q8IUR5 882 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 C16orf45Q96MC5 204 aaPredicted RBP11.71□□□□□ -0.53
CLP1-201ENST00000302731 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 MRPL44Q9H9J2 332 aaKnown RBP11.71□□□□□ -0.53
CLP1-201ENST00000302731 ANKEF1Q9NU02 776 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 ABHD10Q9NUJ1 306 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 CAPN11Q9UMQ6 739 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 R3HCC1Q9Y3T6 440 aaKnown RBP11.71□□□□□ -0.53
CLP1-201ENST00000302731 PAXBP1Q9Y5B6 917 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 A0A1W2PQJ5 194 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 RSPH10B2B2RC85 870 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 CETN3O15182 167 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 ATP9AO75110 1047 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 SLC25A27O95847 323 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 RSPH10BP0C881 870 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 KCNA2P16389 499 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 ICAM3P32942 547 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 PPP2R3AQ06190 1150 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 GOLGA8FQ08AF8 430 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 GOLGA8DPQ0D2H9 430 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.54
CLP1-201ENST00000302731 CLMNQ96JQ2 1002 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.54
CLP1-201ENST00000302731 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.54
CLP1-201ENST00000302731 TTYH3Q9C0H2 523 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 ASCC2Q9H1I8 757 aaPredicted RBP11.71□□□□□ -0.54
CLP1-201ENST00000302731 TYW1Q9NV66 732 aaKnown RBP11.71□□□□□ -0.54
CLP1-201ENST00000302731 PKD2L1Q9P0L9 805 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 BTBD7Q9P203 1132 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 FAM184BQ9ULE4 1060 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 LUC7L2Q9Y383 392 aaKnown RBP11.71□□□□□ -0.54
CLP1-201ENST00000302731 SAMM50Q9Y512 469 aa11.71□□□□□ -0.54
CLP1-201ENST00000302731 SPATA31C2B4DYI2 1134 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 PES1O00541 588 aaKnown RBP11.7□□□□□ -0.54
CLP1-201ENST00000302731 ZBTB39O15060 712 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 EIF3JO75822 258 aaKnown RBP11.7□□□□□ -0.54
CLP1-201ENST00000302731 RGS20O76081 388 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
CLP1-201ENST00000302731 KRT9P35527 623 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 RARRES1P49788 294 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 CASP5P51878 434 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 HERVK_113P62684 666 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 ADAM9Q13443 819 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 ALCAMQ13740 583 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 STXBP2Q15833 593 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 NELFCDQ8IXH7 590 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 ANKRD35Q8N283 1001 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 MYCT1Q8N699 235 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 OR8K1Q8NGG5 319 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 GTF3C2Q8WUA4 911 aaPredicted RBP11.7□□□□□ -0.54
CLP1-201ENST00000302731 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 EEF2KMTQ96G04 330 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 FIZ1Q96SL8 496 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 DNAJC7Q99615 494 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 EDEM3Q9BZQ6 932 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 TRMT1Q9NXH9 659 aaKnown RBP11.7□□□□□ -0.54
CLP1-201ENST00000302731 LARSQ9P2J5 1176 aaKnown RBP11.7□□□□□ -0.54
CLP1-201ENST00000302731 PCDHA10Q9Y5I2 948 aa11.7□□□□□ -0.54
CLP1-201ENST00000302731 TTC26A0AVF1 554 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 SLC16A3O15427 465 aaKnown RBP11.69□□□□□ -0.54
CLP1-201ENST00000302731 GCNT3O95395 438 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 CCNE2O96020 404 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 OSBPP22059 807 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 NR2F2P24468 414 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 EDNRBP24530 442 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 YWHABP31946 246 aaKnown RBP11.69□□□□□ -0.54
CLP1-201ENST00000302731 HOXD13P35453 343 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 MOGSQ13724 837 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 SYCP1Q15431 976 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
CLP1-201ENST00000302731 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 EAPPQ56P03 285 aaPredicted RBP11.69□□□□□ -0.54
CLP1-201ENST00000302731 CYP26C1Q6V0L0 522 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 ZNF720Q7Z2F6 126 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 FRMD5Q7Z6J6 570 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 TRIM59Q8IWR1 403 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 FAM178BQ8IXR5 827 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 SLC17A8Q8NDX2 589 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 CPLX3Q8WVH0 158 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 PPP2R2CQ9Y2T4 447 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 LCTP09848 1927 aa11.69□□□□□ -0.54
CLP1-201ENST00000302731 LOC102724159A0A0B4J2E5 919 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 CCDC175P0C221 793 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 MYBP10242 640 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 TRIM21P19474 475 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms