RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 PKD2L1Q9P0L9 805 aa18.23■□□□□ 0.51
PGAP3-201ENST00000300658 HDAC6Q9UBN7 1215 aa18.23■□□□□ 0.51
PGAP3-201ENST00000300658 RRP15Q9Y3B9 282 aaKnown RBP18.23■□□□□ 0.51
PGAP3-201ENST00000300658 AMPD2Q01433 879 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 SRLQ86TD4 932 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 PRPF38AQ8NAV1 312 aaKnown RBP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 DEFB129Q9H1M3 183 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 HAUS4Q9H6D7 363 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 HOMER2Q9NSB8 354 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 HACL1Q9UJ83 578 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 DDX39AO00148 427 aaKnown RBP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 CYLC1P35663 651 aaPredicted RBP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 EIF4A3P38919 411 aaKnown RBP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 WDR11Q9BZH6 1224 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 CNOT7Q9UIV1 285 aaKnown RBP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 JRKLQ9Y4A0 524 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 IPO5O00410 1097 aaKnown RBP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 EDRF1Q3B7T1 1238 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 KIAA1328Q86T90 577 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 KSR1Q8IVT5 923 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 JAKMIP2Q96AA8 810 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 WNK4Q96J92 1243 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 CCDC42Q96M95 316 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 PURBQ96QR8 312 aaKnown RBP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 MXRA8Q9BRK3 442 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 TUFT1Q9NNX1 390 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 MYO1AQ9UBC5 1043 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 TRAF3IP3Q9Y228 551 aa18.22■□□□□ 0.51
PGAP3-201ENST00000300658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.22■□□□□ 0.51
PGAP3-201ENST00000300658 ATAD5Q96QE3 1844 aa18.21■□□□□ 0.51
PGAP3-201ENST00000300658 TLR2O60603 784 aa18.21■□□□□ 0.51
PGAP3-201ENST00000300658 ALAS1P13196 640 aa18.21■□□□□ 0.51
PGAP3-201ENST00000300658 NMT1P30419 496 aaKnown RBP18.21■□□□□ 0.51
PGAP3-201ENST00000300658 CASP4P49662 377 aa18.21■□□□□ 0.51
PGAP3-201ENST00000300658 KRT83P78385 493 aa18.21■□□□□ 0.51
PGAP3-201ENST00000300658 PACS2Q86VP3 889 aa18.21■□□□□ 0.51
PGAP3-201ENST00000300658 KIAA1683Q9H0B3 1180 aa18.21■□□□□ 0.51
PGAP3-201ENST00000300658 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.5
PGAP3-201ENST00000300658 CLIC2O15247 247 aa18.21■□□□□ 0.5
PGAP3-201ENST00000300658 MTMR2Q13614 643 aa18.21■□□□□ 0.5
PGAP3-201ENST00000300658 ZC2HC1CQ53FD0 456 aaPredicted RBP18.21■□□□□ 0.5
PGAP3-201ENST00000300658 HGSNATQ68CP4 663 aa18.21■□□□□ 0.5
PGAP3-201ENST00000300658 PDXDC1Q6P996 788 aa18.21■□□□□ 0.5
PGAP3-201ENST00000300658 SRGAP1Q7Z6B7 1085 aa18.21■□□□□ 0.5
PGAP3-201ENST00000300658 STK24Q9Y6E0 443 aa18.21■□□□□ 0.5
PGAP3-201ENST00000300658 ASTN1O14525 1302 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 CETN3O15182 167 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 AKAP3O75969 853 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 GCNT3O95395 438 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 MRPS9P82933 396 aaKnown RBP18.2■□□□□ 0.5
PGAP3-201ENST00000300658 KCNH2Q12809 1159 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 ZNF662Q6ZS27 426 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 BANK1Q8NDB2 785 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 FIZ1Q96SL8 496 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 LSM14BQ9BX40 385 aaKnown RBP18.2■□□□□ 0.5
PGAP3-201ENST00000300658 SLC38A10Q9HBR0 1119 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 KCNH7Q9NS40 1196 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 RBBP6Q7Z6E9 1792 aaKnown RBP18.2■□□□□ 0.5
PGAP3-201ENST00000300658 BRCA1P38398 1863 aaKnown RBP18.2■□□□□ 0.5
PGAP3-201ENST00000300658 GNA14O95837 355 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 ATP1A1P05023 1023 aaKnown RBP18.2■□□□□ 0.5
PGAP3-201ENST00000300658 VCAM1P19320 739 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 DPY19L2P1Q6NXN4 242 aa18.2■□□□□ 0.5
PGAP3-201ENST00000300658 RPTORQ8N122 1335 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 DHX15O43143 795 aaKnown RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 CTNND1O60716 968 aaKnown RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 FLOT1O75955 427 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 ZRANB2O95218 330 aaKnown RBP eCLIP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 OAS2P29728 719 aaKnown RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 KIF11P52732 1056 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 CHMP4BP1P59074 171 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 POLR2FP61218 127 aaKnown RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 ASTE1Q2TB18 679 aaPredicted RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 SRGAP2O75044 1071 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 TBCAO75347 108 aaKnown RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 ACTN1P12814 892 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 SPP2Q13103 211 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 TNFAIP1Q13829 316 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 BMT2Q1RMZ1 405 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 SYTL5Q8TDW5 730 aaPredicted RBP18.19■□□□□ 0.5
PGAP3-201ENST00000300658 LPAR1Q92633 364 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 IQCDQ96DY2 449 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 TAAR1Q96RJ0 339 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 PARD6BQ9BYG5 372 aa18.19■□□□□ 0.5
PGAP3-201ENST00000300658 MACROD2A1Z1Q3 448 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 PDXKO00764 312 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 VAV2P52735 878 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 ITGB3BPQ13352 177 aaPredicted RBP18.18■□□□□ 0.5
PGAP3-201ENST00000300658 EPHA7Q15375 998 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 CACNA2D4Q7Z3S7 1137 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 MYCT1Q8N699 235 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 LXNQ9BS40 222 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 MYO6Q9UM54 1294 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 PCDHA13Q9Y5I0 950 aa18.18■□□□□ 0.5
PGAP3-201ENST00000300658 RPS12P25398 132 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms