RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 KCTD1Q719H9 257 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 PIGBQ92521 554 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 CYTH2Q99418 400 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 NCAPGQ9BPX3 1015 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 PSD3Q9NYI0 1048 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 SERPINB13Q9UIV8 391 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 DNAJC12Q9UKB3 198 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 CAPN11Q9UMQ6 739 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 PHEXP78562 749 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
CLPX-201ENST00000300107 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 TTLL11Q8NHH1 800 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 HOOK2Q96ED9 719 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 LRRC37BQ96QE4 947 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■□□□□ 8.6
CLPX-201ENST00000300107 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 ETNK1Q9HBU6 452 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 XAB2Q9HCS7 855 aaKnown RBP13.79□□□□□ -0.2
CLPX-201ENST00000300107 PNMA2Q9UL42 364 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 SNX12Q9UMY4 172 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 LEMD3Q9Y2U8 911 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 NLRP1Q9C000 1473 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 A0A1B0GTH6 734 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 DNAJC8O75937 253 aaPredicted RBP13.79□□□□□ -0.2
CLPX-201ENST00000300107 ZBTB17Q13105 803 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 RAPH1Q70E73 1250 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 ATP6V0A1Q93050 837 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 HAUS8Q9BT25 410 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 TMEM60Q9H2L4 133 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 SLITRK6Q9H5Y7 841 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 SUDS3Q9H7L9 328 aaPredicted RBP13.79□□□□□ -0.2
CLPX-201ENST00000300107 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 SMYD2Q9NRG4 433 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 PACSIN2Q9UNF0 486 aaPredicted RBP13.79□□□□□ -0.2
CLPX-201ENST00000300107 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 SERPINB2P05120 415 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 BRAFP15056 766 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 DRP2Q13474 957 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 ARHGAP27Q6ZUM4 889 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 PIP4K2CQ8TBX8 421 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 HDAC11Q96DB2 347 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 DYNLL2Q96FJ2 89 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 ADPGKQ9BRR6 497 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 BRIP1Q9BX63 1249 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 EDEM3Q9BZQ6 932 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
CLPX-201ENST00000300107 USP17L3A6NCW0 530 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 USP17L4A6NCW7 530 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 KIF28PB7ZC32 967 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 STX1BP61266 288 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 RASGRP2Q7LDG7 609 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 USP17L1Q7RTZ2 530 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 PCGF5Q86SE9 256 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 RUBCNQ92622 972 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 SERPINI1Q99574 410 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 KANSL2Q9H9L4 492 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 SAYSD1Q9NPB0 183 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 PPARGC1AQ9UBK2 798 aaKnown RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 ERFEQ4G0M1 354 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 CNKSR1Q969H4 720 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 CCPG1Q9ULG6 757 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 NEDD4P46934 1319 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 SPAG7O75391 227 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 ZRANB2O95218 330 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLPX-201ENST00000300107 ACTN1P12814 892 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 UBXN2AP68543 259 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 UBE2SQ16763 222 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 NYAP1Q6ZVC0 841 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 FBXL5Q9UKA1 691 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 SORBS3O60504 671 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 KRT37O76014 449 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 CCNI2Q6ZMN8 369 aaPredicted RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 EPM2AIP1Q7L775 607 aaPredicted RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 ARMC2Q8NEN0 867 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 CHP1Q99653 195 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 FAM167BQ9BTA0 163 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 GINM1Q9NU53 330 aa13.78□□□□□ -0.2
CLPX-201ENST00000300107 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.78□□□□□ -0.2
CLPX-201ENST00000300107 EIF3HO15372 352 aaKnown RBP eCLIP13.77□□□□□ -0.2
CLPX-201ENST00000300107 CAV1Q03135 178 aa13.77□□□□□ -0.2
CLPX-201ENST00000300107 CAPRIN2Q6IMN6 1127 aaKnown RBP13.77□□□□□ -0.2
CLPX-201ENST00000300107 WDR75Q8IWA0 830 aaKnown RBP13.77□□□□□ -0.2
CLPX-201ENST00000300107 CCDC68Q9H2F9 335 aa13.77□□□□□ -0.2
CLPX-201ENST00000300107 DBNDD1Q9H9R9 158 aa13.77□□□□□ -0.2
CLPX-201ENST00000300107 MLXIPLQ9NP71 852 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms