RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ADAMTS1Q9UHI8 967 aa11.1□□□□□ -0.63
FOXN4-201ENST00000299162 RABGAP1Q9Y3P9 1069 aa11.1□□□□□ -0.63
FOXN4-201ENST00000299162 MYH7BA7E2Y1 1941 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 CCDC151A5D8V7 595 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 CLSTN1O94985 981 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 FGFR1OPO95684 399 aaKnown RBP11.09□□□□□ -0.63
FOXN4-201ENST00000299162 ARP10275 920 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 SLC9A1P19634 815 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
FOXN4-201ENST00000299162 COG2Q14746 738 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 NIM1KQ8IY84 436 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 SEPT11Q9NVA2 429 aaKnown RBP11.09□□□□□ -0.63
FOXN4-201ENST00000299162 CTDP1Q9Y5B0 961 aaPredicted RBP11.09□□□□□ -0.63
FOXN4-201ENST00000299162 SAR1BQ9Y6B6 198 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 ZNF831Q5JPB2 1677 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 GCOM1H8Y6P7 765 aaPredicted RBP11.09□□□□□ -0.63
FOXN4-201ENST00000299162 FAM13AO94988 1023 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 POLR2MP0CAP2 368 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 SPATA31C1P0DKV0 1188 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 NFRKBQ6P4R8 1299 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 LRRC31Q6UY01 552 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 NSMFQ6X4W1 530 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 CCDC91Q7Z6B0 441 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 SLFN12Q8IYM2 578 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 CEP112Q8N8E3 955 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 PRPF38AQ8NAV1 312 aaKnown RBP11.09□□□□□ -0.63
FOXN4-201ENST00000299162 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 NUP58Q9BVL2 599 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 HAUS4Q9H6D7 363 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 RAVER2Q9HCJ3 691 aaKnown RBP11.09□□□□□ -0.63
FOXN4-201ENST00000299162 KCNMB3Q9NPA1 279 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 KDM3AQ9Y4C1 1321 aa11.09□□□□□ -0.63
FOXN4-201ENST00000299162 CETN3O15182 167 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 EIF2AK2P19525 551 aaKnown RBP11.08□□□□□ -0.64
FOXN4-201ENST00000299162 USP11P51784 963 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 MKL1Q969V6 931 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 ELMO3Q96BJ8 720 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 MTMR8Q96EF0 704 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 PCDHA13Q9Y5I0 950 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 NFIBO00712 420 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 KIF1CO43896 1103 aaKnown RBP11.08□□□□□ -0.64
FOXN4-201ENST00000299162 FTCDO95954 541 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 SCP2P22307 547 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 INPP5BP32019 993 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 SLC7A5Q01650 507 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 LRRC63Q05C16 580 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 KCNMA1Q12791 1236 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 GIT2Q14161 759 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 PROCA1Q8NCQ7 364 aaPredicted RBP11.08□□□□□ -0.64
FOXN4-201ENST00000299162 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 LENG9Q96B70 501 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 ZNF577Q9BSK1 485 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 PCIF1Q9H4Z3 704 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 ANKZF1Q9H8Y5 726 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 GOPCQ9HD26 462 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 SIK3Q9Y2K2 1263 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 MYH4Q9Y623 1939 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 CENPFP49454 3210 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 LRRIQ3A6PVS8 624 aaPredicted RBP11.08□□□□□ -0.64
FOXN4-201ENST00000299162 USO1O60763 962 aaKnown RBP11.08□□□□□ -0.64
FOXN4-201ENST00000299162 INHBEP58166 350 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 CXCL9Q07325 125 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 RASA3Q14644 834 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 RSRC2Q7L4I2 434 aaKnown RBP11.08□□□□□ -0.64
FOXN4-201ENST00000299162 LDHDQ86WU2 507 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 HOOK2Q96ED9 719 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 CCDC43Q96MW1 224 aaKnown RBP11.08□□□□□ -0.64
FOXN4-201ENST00000299162 PACSIN1Q9BY11 444 aa11.08□□□□□ -0.64
FOXN4-201ENST00000299162 TISP43B9A030 160 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 SLC12A3P55017 1021 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
FOXN4-201ENST00000299162 RPAINQ86UA6 219 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 AFAP1L1Q8TED9 768 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 ERGIC2Q96RQ1 377 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 SALL4Q9UJQ4 1053 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 FLOT1O75955 427 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 MAP2K2P36507 400 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 MAP9Q49MG5 647 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 CCDC181Q5TID7 509 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 SYCP3Q8IZU3 236 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 ARMCX3Q9UH62 379 aaPredicted RBP11.07□□□□□ -0.64
FOXN4-201ENST00000299162 PDE2AO00408 941 aaPredicted RBP11.07□□□□□ -0.64
FOXN4-201ENST00000299162 WNT10BO00744 389 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 ZEB2O60315 1214 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 ENTPD3O75355 529 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 ERLIN2O94905 339 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 TRIM49P0CI25 452 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 TRIM49CP0CI26 452 aa11.07□□□□□ -0.64
FOXN4-201ENST00000299162 KLHL30Q0D2K2 578 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms