RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 DNERQ8NFT8 737 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 ZNF507Q8TCN5 953 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 KIAA1217Q5T5P2 1943 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 A0A1W2PQC6 194 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 B4DLN1 442 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 FAM13AO94988 1023 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 CASP5P51878 434 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 FKBP3Q00688 224 aaKnown RBP15.77■□□□□ 0.11
C9orf3-202ENST00000297979 MOGSQ13724 837 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 CEP135Q66GS9 1140 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 TMEM139Q8IV31 216 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 CDHR1Q96JP9 859 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 IWS1Q96ST2 819 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 BAG1Q99933 345 aaPredicted RBP15.77■□□□□ 0.11
C9orf3-202ENST00000297979 KCTD10Q9H3F6 313 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 OLFML3Q9NRN5 406 aa15.77■□□□□ 0.11
C9orf3-202ENST00000297979 LYPLA2O95372 231 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 GYPCP04921 128 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 EPM2AIP1Q7L775 607 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-202ENST00000297979 PANX2Q96RD6 677 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 NOC4LQ9BVI4 516 aaKnown RBP15.76■□□□□ 0.11
C9orf3-202ENST00000297979 MRPL44Q9H9J2 332 aaKnown RBP15.76■□□□□ 0.11
C9orf3-202ENST00000297979 ODF2LQ9ULJ1 636 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 MFAP3LO75121 409 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 RGS20O76081 388 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 CCNE2O96020 404 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 POTEJP0CG39 1038 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 GNPTABQ3T906 1256 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 ZNF746Q6NUN9 644 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-202ENST00000297979 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 NCAPG2Q86XI2 1143 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 CNGA4Q8IV77 575 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 CCAR2Q8N163 923 aaKnown RBP15.76■□□□□ 0.11
C9orf3-202ENST00000297979 RDM1Q8NG50 284 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 DBR1Q9UK59 544 aaKnown RBP15.76■□□□□ 0.11
C9orf3-202ENST00000297979 TRAF5O00463 557 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 STX10O60499 249 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 CNMDO75829 334 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 OSBPP22059 807 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 GUCY2CP25092 1073 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 MIIPQ5JXC2 388 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-202ENST00000297979 CEP63Q96MT8 703 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 PARVGQ9HBI0 331 aa15.76■□□□□ 0.11
C9orf3-202ENST00000297979 USP27XA6NNY8 438 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 ARHGAP6O43182 974 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 MYBP10242 640 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 KCNA2P16389 499 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 CASP14P31944 242 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 BMT2Q1RMZ1 405 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 E4F1Q66K89 784 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-202ENST00000297979 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 MOV10L1Q9BXT6 1211 aaKnown RBP15.75■□□□□ 0.11
C9orf3-202ENST00000297979 ZNF408Q9H9D4 720 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 SEL1LQ9UBV2 794 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 NFASCO94856 1347 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 UNCXA6NJT0 531 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 GJA5P36382 358 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 ZNF131P52739 623 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 PSMC5P62195 406 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 CNTN2Q02246 1040 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 SNAPC2Q13487 334 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 KNOP1Q1ED39 458 aaKnown RBP15.75■□□□□ 0.11
C9orf3-202ENST00000297979 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 C4orf19Q8IY42 314 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 MYCT1Q8N699 235 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 CCDC51Q96ER9 411 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 POLD4Q9HCU8 107 aa15.75■□□□□ 0.11
C9orf3-202ENST00000297979 GCNT3O95395 438 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 SLC25A27O95847 323 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 FXR1P51114 621 aaKnown RBP eCLIP15.74■□□□□ 0.11
C9orf3-202ENST00000297979 ALDH5A1P51649 535 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-202ENST00000297979 TBC1D8BQ0IIM8 1120 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 STXBP2Q15833 593 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 MAN2A1Q16706 1144 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 UGCGQ16739 394 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 GPAT2Q6NUI2 795 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 PADI6Q6TGC4 694 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 ASTN1O14525 1302 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 SFI1A8K8P3 1242 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 SPATA31C2B4DYI2 1134 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 COPB2P35606 906 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 RARRES1P49788 294 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 VWA3BQ502W6 1294 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 FKBP15Q5T1M5 1219 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 ZC3H3Q8IXZ2 948 aaKnown RBP15.74■□□□□ 0.11
C9orf3-202ENST00000297979 SMAP1Q8IYB5 467 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-202ENST00000297979 C16orf45Q96MC5 204 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-202ENST00000297979 BCAS3Q9H6U6 928 aa15.74■□□□□ 0.11
C9orf3-202ENST00000297979 TRMT1Q9NXH9 659 aaKnown RBP15.74■□□□□ 0.11
C9orf3-202ENST00000297979 EIF3DO15371 548 aaKnown RBP eCLIP15.73■□□□□ 0.11
C9orf3-202ENST00000297979 PRPF6O94906 941 aaKnown RBP15.73■□□□□ 0.11
C9orf3-202ENST00000297979 GNA14O95837 355 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 ERCC3P19447 782 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 YWHABP31946 246 aaKnown RBP15.73■□□□□ 0.11
C9orf3-202ENST00000297979 EGFL6Q8IUX8 553 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 CCDC43Q96MW1 224 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms