RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NFU1Q9UMS0 254 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
UBAP1-201ENST00000297661 A0A1B0GUA9 196 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 ESYT2A0FGR8 921 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 USO1O60763 962 aaKnown RBP17.06■□□□□ 0.32
UBAP1-201ENST00000297661 MAGEA1P43355 309 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 CARSP49589 748 aaKnown RBP17.06■□□□□ 0.32
UBAP1-201ENST00000297661 KCNMA1Q12791 1236 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 NAIF1Q69YI7 327 aaPredicted RBP17.06■□□□□ 0.32
UBAP1-201ENST00000297661 CCDC50Q8IVM0 306 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 CEP120Q8N960 986 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 BAP1Q92560 729 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 SGSM3Q96HU1 749 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 MS4A14Q96JA4 679 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 ATP6V1G3Q96LB4 118 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 TSGA10Q9BZW7 698 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 HAUS2Q9NVX0 235 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 KIAA1024Q9UPX6 916 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 GAKO14976 1311 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PRLRP16471 622 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 ZFPM1Q8IX07 1006 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 KIRREL3Q8IZU9 778 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 RBM12Q9NTZ6 932 aaKnown RBP17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PVALEFA0A1B0GWK0 134 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 POTEB3A0JP26 581 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 POTECB2RU33 542 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 DNM1LO00429 736 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PRELPP51888 382 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 ASPRV1Q53RT3 343 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 FIGNQ5HY92 759 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 POTEBQ6S5H4 581 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 DNAAF5Q86Y56 855 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 MYOCDQ8IZQ8 938 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 DNAJC19Q96DA6 116 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 MTMR8Q96EF0 704 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 OSBPL7Q9BZF2 842 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 USP40Q9NVE5 1235 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PANK4Q9NVE7 773 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 HYOU1Q9Y4L1 999 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PCDHAC2Q9Y5I4 1007 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 ESYT3A0FGR9 886 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 FAM170AA1A519 330 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 GLI1P08151 1106 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 TCP1P17987 556 aaKnown RBP17.05■□□□□ 0.32
UBAP1-201ENST00000297661 GABPAQ06546 454 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 NFIAQ12857 509 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 ITGB3BPQ13352 177 aaPredicted RBP17.05■□□□□ 0.32
UBAP1-201ENST00000297661 C15orf52Q6ZUT6 534 aaKnown RBP17.05■□□□□ 0.32
UBAP1-201ENST00000297661 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 IFT20Q8IY31 132 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 MAGEC3Q8TD91 643 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 IFT81Q8WYA0 676 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PCDHA12Q9UN75 941 aa17.05■□□□□ 0.32
UBAP1-201ENST00000297661 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 ZSCAN5CA6NGD5 496 aaPredicted RBP17.04■□□□□ 0.32
UBAP1-201ENST00000297661 NFKBIEO00221 500 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 RTN2O75298 545 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 TTLL1O95922 423 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 HPDP32754 393 aaPredicted RBP17.04■□□□□ 0.32
UBAP1-201ENST00000297661 PAFAH1B1P43034 410 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 GUCY2FP51841 1108 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 RNASE9P60153 205 aaKnown RBP17.04■□□□□ 0.32
UBAP1-201ENST00000297661 PPARDQ03181 441 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 AOC3Q16853 763 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 TMEM119Q4V9L6 283 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 EGFL6Q8IUX8 553 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 PSTPIP2Q9H939 334 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 RIC8AQ9NPQ8 531 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 SERPINB13Q9UIV8 391 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 NT5C2P49902 561 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 POLR2FP61218 127 aaKnown RBP17.04■□□□□ 0.32
UBAP1-201ENST00000297661 CDK17Q00537 523 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 TCP10Q12799 353 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 SEMA3FQ13275 785 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 PTPROQ16827 1216 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 TLDC1Q6P9B6 456 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 CD302Q8IX05 232 aa17.04■□□□□ 0.32
UBAP1-201ENST00000297661 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
UBAP1-201ENST00000297661 SRRM3A6NNA2 597 aaPredicted RBP17.03■□□□□ 0.32
UBAP1-201ENST00000297661 HMGB1P1B2RPK0 211 aaPredicted RBP17.03■□□□□ 0.32
UBAP1-201ENST00000297661 SHMT1P34896 483 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 PPP1R2P41236 205 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 NOVP48745 357 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 FAM26FQ5R3K3 315 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 PDXDC1Q6P996 788 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 CUL5Q93034 780 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
UBAP1-201ENST00000297661 TSG101Q99816 390 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 ATP6V0A4Q9HBG4 840 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 PACSIN2Q9UNF0 486 aaPredicted RBP17.03■□□□□ 0.32
UBAP1-201ENST00000297661 MEIS1O00470 390 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 TLR2O60603 784 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 HNRNPH3P31942 346 aaKnown RBP17.03■□□□□ 0.32
UBAP1-201ENST00000297661 LRRC63Q05C16 580 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 EHHADHQ08426 723 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms