RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
RHO-201ENST00000296271 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 PPP1R1BQ9UD71 204 aaPredicted RBP12.97□□□□□ -0.33
RHO-201ENST00000296271 CCDC151A5D8V7 595 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 TULP1O00294 542 aaPredicted RBP12.96□□□□□ -0.33
RHO-201ENST00000296271 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 TGFB1I1O43294 461 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 CYP3A4P08684 503 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 ITGB5P18084 799 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.33
RHO-201ENST00000296271 MYCT1Q8N699 235 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 GTPBP4Q9BZE4 634 aaKnown RBP12.96□□□□□ -0.33
RHO-201ENST00000296271 WDR11Q9BZH6 1224 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 GANQ9H2C0 597 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 RAB21Q9UL25 225 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 ZNF536O15090 1300 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.33
RHO-201ENST00000296271 ERICH4A6NGS2 130 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 CETN3O15182 167 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 GAS7O60861 476 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 LRRN2O75325 713 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 ZBTB7AO95365 584 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 EYA4O95677 639 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 RASA3Q14644 834 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 SFMBT2Q5VUG0 894 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.34
RHO-201ENST00000296271 RBM46Q8TBY0 533 aaKnown RBP12.96□□□□□ -0.34
RHO-201ENST00000296271 CAGE1Q8TC20 777 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 WNK4Q96J92 1243 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 CEP63Q96MT8 703 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 ZNF577Q9BSK1 485 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 PDE11AQ9HCR9 933 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 CEP72Q9P209 647 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 ZMYM2Q9UBW7 1377 aa12.96□□□□□ -0.34
RHO-201ENST00000296271 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
RHO-201ENST00000296271 NR3C1P04150 777 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 EPS15P42566 896 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 NAP1L1P55209 391 aaKnown RBP12.95□□□□□ -0.34
RHO-201ENST00000296271 RNASE9P60153 205 aaKnown RBP12.95□□□□□ -0.34
RHO-201ENST00000296271 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 C1orf186Q6ZWK4 172 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 CREG2Q8IUH2 290 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 UBXN6Q9BZV1 441 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 RAVER2Q9HCJ3 691 aaKnown RBP12.95□□□□□ -0.34
RHO-201ENST00000296271 TBCAO75347 108 aaKnown RBP12.95□□□□□ -0.34
RHO-201ENST00000296271 LCA5LO95447 670 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 FTCDO95954 541 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 KLRC1P26715 233 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 SLC7A5Q01650 507 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 SAMD7Q7Z3H4 446 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 ZSWIM2Q8NEG5 633 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 SLC5A5Q92911 643 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 FIZ1Q96SL8 496 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.34
RHO-201ENST00000296271 ARMCX3Q9UH62 379 aaPredicted RBP12.95□□□□□ -0.34
RHO-201ENST00000296271 CCPG1Q9ULG6 757 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 L1RE1Q9UN81 338 aa12.95□□□□□ -0.34
RHO-201ENST00000296271 PHACTR2O75167 634 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 PON1P27169 355 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 USP14P54578 494 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 PTK2Q05397 1052 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 BRD3Q15059 726 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 ZNF662Q6ZS27 426 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 ZC3H3Q8IXZ2 948 aaKnown RBP12.94□□□□□ -0.34
RHO-201ENST00000296271 RTKN2Q8IZC4 609 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 PSMD1Q99460 953 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 POLR3CQ9BUI4 534 aaPredicted RBP12.94□□□□□ -0.34
RHO-201ENST00000296271 SNX12Q9UMY4 172 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 TRAF3IP3Q9Y228 551 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 MAP2K7O14733 419 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 ALAS1P13196 640 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 CYP2J2P51589 502 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 MARSP56192 900 aaKnown RBP12.94□□□□□ -0.34
RHO-201ENST00000296271 SPP2Q13103 211 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 HOOK2Q96ED9 719 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 LXNQ9BS40 222 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 TLR10Q9BXR5 811 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 TELO2Q9Y4R8 837 aa12.94□□□□□ -0.34
RHO-201ENST00000296271 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
RHO-201ENST00000296271 USO1O60763 962 aaKnown RBP12.93□□□□□ -0.34
RHO-201ENST00000296271 FAM13AO94988 1023 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 TRIM49P0CI25 452 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 TRIM49CP0CI26 452 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 PRELPP51888 382 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 GABPB1Q06547 395 aaPredicted RBP12.93□□□□□ -0.34
RHO-201ENST00000296271 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 KLHDC7AQ5VTJ3 777 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 ZNF571Q7Z3V5 609 aaPredicted RBP12.93□□□□□ -0.34
RHO-201ENST00000296271 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 MYOZ2Q9NPC6 264 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 PSME4Q14997 1843 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 RBBP6Q7Z6E9 1792 aaKnown RBP12.93□□□□□ -0.34
RHO-201ENST00000296271 SORBS3O60504 671 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms