RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TTC39CQ8N584 583 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 CYP39A1Q9NYL5 469 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 SSH2Q76I76 1423 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 WASHC2DQ5SRD0 308 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 ZNF184Q99676 751 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 NOL6Q9H6R4 1146 aaKnown RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 MARCH7Q9H992 704 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 WARS2Q9UGM6 360 aaKnown RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 XPO1O14980 1071 aaKnown RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 MOCS3O95396 460 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 AKR1D1P51857 326 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 ADRM1Q16186 407 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 UAP1Q16222 522 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 WDR45BQ5MNZ6 344 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 CCDC105Q8IYK2 499 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 TERB1Q8NA31 727 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 COX4I2Q96KJ9 171 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 ZNF570Q96NI8 536 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 MRPL1Q9BYD6 325 aaKnown RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 UBXN6Q9BZV1 441 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 PIDD1Q9HB75 910 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 GTF3C4Q9UKN8 822 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 OLR1P78380 273 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 PRKG1Q13976 671 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 RGS21Q2M5E4 152 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 DPF2Q92785 391 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 SAMSN1Q9NSI8 373 aaKnown RBP12.6□□□□□ -0.39
SNIP1-201ENST00000296215 TLK1Q9UKI8 766 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 DNM1LO00429 736 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 DR1Q01658 176 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 PTK2Q05397 1052 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 SLC34A1Q06495 639 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 GSTA3Q16772 222 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 GSTA5Q7RTV2 222 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 CCNJLQ8IV13 435 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 DGCR14Q96DF8 476 aaKnown RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 AS3MTQ9HBK9 375 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 ETNK2Q9NVF9 386 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 A0A0G2JND7 137 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 ZNF185O15231 689 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 ASNA1O43681 348 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 TRIP10Q15642 601 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 CNPY1Q3B7I2 92 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 TCP11X2Q5H9J9 407 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 RRN3Q9NYV6 651 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 LRWD1Q9UFC0 647 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 STX8Q9UNK0 236 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 DIS3Q9Y2L1 958 aaKnown RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 SRRM3A6NNA2 597 aaPredicted RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 TARSP26639 723 aaKnown RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 HALP42357 657 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 THOC5Q13769 683 aaKnown RBP12.59□□□□□ -0.39
SNIP1-201ENST00000296215 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 LRRC74BQ6ZQY2 392 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 FRA10AC1Q70Z53 315 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 PTF1AQ7RTS3 328 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 SLC7A5P2Q9GIP4 190 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 EXOC7Q9UPT5 735 aa12.59□□□□□ -0.39
SNIP1-201ENST00000296215 F6X3S4 739 aa12.58□□□□□ -0.39
SNIP1-201ENST00000296215 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.39
SNIP1-201ENST00000296215 CYP27A1Q02318 531 aa12.58□□□□□ -0.39
SNIP1-201ENST00000296215 SSRP1Q08945 709 aaKnown RBP12.58□□□□□ -0.39
SNIP1-201ENST00000296215 SEL1L2Q5TEA6 688 aa12.58□□□□□ -0.39
SNIP1-201ENST00000296215 RSBN1Q5VWQ0 802 aaPredicted RBP12.58□□□□□ -0.39
SNIP1-201ENST00000296215 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.39
SNIP1-201ENST00000296215 SLC43A3Q8NBI5 491 aa12.58□□□□□ -0.39
SNIP1-201ENST00000296215 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.39
SNIP1-201ENST00000296215 THAP12O43422 761 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 SNX2O60749 519 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 PRKACAP17612 351 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 GABPB2Q8TAK5 448 aaPredicted RBP12.58□□□□□ -0.4
SNIP1-201ENST00000296215 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 SYBUQ9NX95 663 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 ATF4P18848 351 aaPredicted RBP12.58□□□□□ -0.4
SNIP1-201ENST00000296215 PTK2BQ14289 1009 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 KCNJ12Q14500 433 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 SFR1Q86XK3 245 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 RNPEPQ9H4A4 650 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 ZNF304Q9HCX3 659 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 NLRC4Q9NPP4 1024 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 GIN1Q9NXP7 522 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 RPRD2Q5VT52 1461 aaKnown RBP12.58□□□□□ -0.4
SNIP1-201ENST00000296215 PRPF6O94906 941 aaKnown RBP12.58□□□□□ -0.4
SNIP1-201ENST00000296215 CARSP49589 748 aaKnown RBP12.58□□□□□ -0.4
SNIP1-201ENST00000296215 STX1BP61266 288 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 PLCB3Q01970 1234 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms