RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 SEC24CP53992 1094 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 DCAF17Q5H9S7 520 aaPredicted RBP20.96■□□□□ 0.95
LSM12-201ENST00000293406 SLFN12Q8IYM2 578 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 ARFGAP2Q8N6H7 521 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 METTL13Q8N6R0 699 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 TPCN2Q8NHX9 752 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 CCT8L2Q96SF2 557 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.96■□□□□ 0.959e-7■□□□□ 10.7
LSM12-201ENST00000293406 NOC2LQ9Y3T9 749 aaKnown RBP20.96■□□□□ 0.95
LSM12-201ENST00000293406 CAPN7Q9Y6W3 813 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 PRKCIP41743 596 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 DDX42Q86XP3 938 aaKnown RBP eCLIP20.96■□□□□ 0.95
LSM12-201ENST00000293406 RBM46Q8TBY0 533 aaKnown RBP20.96■□□□□ 0.95
LSM12-201ENST00000293406 MYCBPAPQ8TBZ2 947 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 GLT8D2Q9H1C3 349 aa20.96■□□□□ 0.95
LSM12-201ENST00000293406 MPHOSPH10O00566 681 aaKnown RBP20.95■□□□□ 0.94
LSM12-201ENST00000293406 GUCY2CP25092 1073 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 GIT2Q14161 759 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 TRAPPC3LQ5T215 181 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 PEX26Q7Z412 305 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 ANO3Q9BYT9 981 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 DDX4Q9NQI0 724 aaKnown RBP20.95■□□□□ 0.94
LSM12-201ENST00000293406 ARFGEF1Q9Y6D6 1849 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 CYP3A7-CYP3A51PA0A087WV96 503 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 KRIT1O00522 736 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 CALUO43852 315 aaPredicted RBP20.95■□□□□ 0.94
LSM12-201ENST00000293406 CYP3A7P24462 503 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 HNRNPH1P31943 449 aaKnown RBP20.95■□□□□ 0.94
LSM12-201ENST00000293406 CTNNA1P35221 906 aaKnown RBP20.95■□□□□ 0.94
LSM12-201ENST00000293406 VPS36Q86VN1 386 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 SFR1Q86XK3 245 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 CATSPER3Q86XQ3 398 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 PLCD3Q8N3E9 789 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 LMBR1Q8WVP7 490 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 DDX47Q9H0S4 455 aaKnown RBP20.95■□□□□ 0.94
LSM12-201ENST00000293406 MYH4Q9Y623 1939 aa20.95■□□□□ 0.94
LSM12-201ENST00000293406 E7EVH7 732 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 H0YGN5 161 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 CCDC188H7C350 402 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 ANXA13P27216 316 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 HOXD13P35453 343 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 GTF2IP78347 998 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 PABPC4Q13310 644 aaKnown RBP eCLIP20.94■□□□□ 0.947e-8■■□□□ 12.3
LSM12-201ENST00000293406 UAP1Q16222 522 aaPredicted RBP20.94■□□□□ 0.94
LSM12-201ENST00000293406 TCERG1LQ5VWI1 586 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 PRR5LQ6MZQ0 368 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 CNPY4Q8N129 248 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 OR2W6PQ8NHA6 318 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 REEP2Q9BRK0 252 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 POLLQ9UGP5 575 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 DNM3Q9UQ16 869 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 NFS1Q9Y697 457 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 FOCADQ5VW36 1801 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 SRRM3A6NNA2 597 aaPredicted RBP20.94■□□□□ 0.94
LSM12-201ENST00000293406 H0YHG0 523 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 MEIS1O00470 390 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 PDXKO00764 312 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 AKAP3O75969 853 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 FAM107AO95990 144 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 H2AFZP0C0S5 128 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 ZBTB48P10074 688 aaPredicted RBP20.94■□□□□ 0.94
LSM12-201ENST00000293406 SHMT1P34896 483 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 PSMC6P62333 389 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 HDLBPQ00341 1268 aaKnown RBP20.94■□□□□ 0.94
LSM12-201ENST00000293406 EPHA7Q15375 998 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 H2AFVQ71UI9 128 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 EPM2AIP1Q7L775 607 aaPredicted RBP20.94■□□□□ 0.94
LSM12-201ENST00000293406 YTHDF3Q7Z739 585 aaKnown RBP20.94■□□□□ 0.94
LSM12-201ENST00000293406 PROCA1Q8NCQ7 364 aaPredicted RBP20.94■□□□□ 0.94
LSM12-201ENST00000293406 TBC1D16Q8TBP0 767 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 PCDHA1Q9Y5I3 950 aa20.94■□□□□ 0.94
LSM12-201ENST00000293406 BHMG1C9JSJ3 638 aaPredicted RBP20.93■□□□□ 0.94
LSM12-201ENST00000293406 FSBPO95073 299 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 QRICH1Q2TAL8 776 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 SYT2Q8N9I0 419 aaPredicted RBP20.93■□□□□ 0.94
LSM12-201ENST00000293406 PRPF38AQ8NAV1 312 aaKnown RBP20.93■□□□□ 0.94
LSM12-201ENST00000293406 ERMNQ8TAM6 284 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 MBOAT7Q96N66 472 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 NEUROG2Q9H2A3 272 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 MYO3BQ8WXR4 1341 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 F8W031 263 aaPredicted RBP20.93■□□□□ 0.94
LSM12-201ENST00000293406 C6orf229H3BNL8 230 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 USP8P40818 1118 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 ZNF844Q08AG5 666 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 MCTP2Q6DN12 878 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 RUFY4Q6ZNE9 571 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 SLFN11Q7Z7L1 901 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 SYCE1Q8N0S2 351 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 METTL14Q9HCE5 456 aaKnown RBP20.93■□□□□ 0.94
LSM12-201ENST00000293406 PPANQ9NQ55 473 aaKnown RBP20.93■□□□□ 0.94
LSM12-201ENST00000293406 SUCLA2Q9P2R7 463 aaPredicted RBP20.93■□□□□ 0.94
LSM12-201ENST00000293406 AMACRQ9UHK6 382 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 FBXL5Q9UKA1 691 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 NENFQ9UMX5 172 aa20.93■□□□□ 0.94
LSM12-201ENST00000293406 ATP8B3O60423 1300 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 C10orf71Q711Q0 1435 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 A0A0A6YYK5 440 aaPredicted RBP20.92■□□□□ 0.94
LSM12-201ENST00000293406 RAD21O60216 631 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 FNTAP49354 379 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 SPIRE1Q08AE8 756 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms