RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ZNF507Q8TCN5 953 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 BARD1Q99728 777 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 ANO3Q9BYT9 981 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GRIP2Q9C0E4 1043 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ATXN3LQ9H3M9 355 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PLEKHA5Q9HAU0 1116 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 AGO4Q9HCK5 861 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 TRIM17Q9Y577 477 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ZFYVE9O95405 1425 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 KIAA1210Q9ULL0 1709 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 HMX3A6NHT5 357 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GOLGA6L22H0YM25 854 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ETV3P41162 512 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 NPTX2P47972 431 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GTF2A2P52657 109 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SPIDRQ14159 915 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ZNF697Q5TEC3 545 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 POTEEQ6S8J3 1075 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 FAM180AQ6UWF9 173 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ANKRD23Q86SG2 305 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GATAD2AQ86YP4 633 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ZZZ3Q8IYH5 903 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TAGAPQ8N103 731 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 FIBCD1Q8N539 461 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 STK35Q8TDR2 534 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 IQCDQ96DY2 449 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 MVB12AQ96EY5 273 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 MIPEPQ99797 713 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 KATNAL1Q9BW62 490 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 NUP62CLQ9H1M0 184 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TBC1D22BQ9NU19 505 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TRMT13Q9NUP7 481 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 ZNF214Q9UL59 606 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 SNX5Q9Y5X3 404 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 LMTK3Q96Q04 1460 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PPFIA3O75145 1194 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ALOX15P16050 662 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 ARL3P36405 182 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 CCT2P78371 535 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 CDK17Q00537 523 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SPIRE1Q08AE8 756 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SAMD5Q5TGI4 173 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GADL1Q6ZQY3 521 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PDZD4Q76G19 769 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 CEP68Q76N32 757 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 CABP7Q86V35 215 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 AFG1LQ8WV93 481 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ERCC4Q92889 916 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 GMCL1Q96IK5 515 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TMEM87BQ96K49 555 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 RIPOR3Q96MK2 946 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SLC13A1Q9BZW2 595 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GPR45Q9Y5Y3 372 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 FGD6Q6ZV73 1430 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 C9IYK1 514 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TNFRSF10AO00220 468 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 KRT38O76015 456 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 BAIAP3O94812 1187 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 HSPA1AP0DMV8 641 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 HSPA1BP0DMV9 641 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 PPM1AP35813 382 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PAPOLAP51003 745 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 LRRC32Q14392 662 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PRAMEF13Q5VWM6 474 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 DUSP27Q5VZP5 1158 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 APOA5Q6Q788 366 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 KLHL17Q6TDP4 642 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ANKLE2Q86XL3 938 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 KIF18BQ86Y91 864 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 C1orf162Q8NEQ5 155 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 NOC3LQ8WTT2 800 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 IPCEF1Q8WWN9 437 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 FAM163AQ96GL9 167 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 RADILQ96JH8 1075 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 UHRF1Q96T88 793 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 MYCBPQ99417 103 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 ALDH8A1Q9H2A2 487 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 IPPKQ9H8X2 491 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ZNF277Q9NRM2 450 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 KRT82Q9NSB4 513 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SACM1LQ9NTJ5 587 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 DACT1Q9NYF0 836 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SRPK3Q9UPE1 567 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TTC36A6NLP5 189 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 FAM155AB1AL88 458 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 DLX3O60479 287 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 LILRB5O75023 590 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TBC1D8O95759 1140 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 DHRS4L1P0CG22 281 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PDE6AP16499 860 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 NOP2P46087 812 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 PER3P56645 1201 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 HSF5Q4G112 596 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 RETSATQ6NUM9 610 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PPFIBP1Q86W92 1011 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TMEM145Q8NBT3 493 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 BAHD1Q8TBE0 780 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 TBC1D5Q92609 795 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 HDAC10Q969S8 669 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms