RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 INPP4AQ96PE3 977 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 PTPN18Q99952 460 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 TISP43B9A030 160 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 BACH1O14867 736 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 BCRP11274 1271 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 CENPPQ6IPU0 288 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 PADI6Q6TGC4 694 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 NOC3LQ8WTT2 800 aaKnown RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 TUBGCP2Q9BSJ2 902 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 KIFC3Q9BVG8 833 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 TUFT1Q9NNX1 390 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 MCM3APO60318 1980 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 ZNF862O60290 1169 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 FAM13AO94988 1023 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 CASP14P31944 242 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 YWHABP31946 246 aaKnown RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 QARSP47897 775 aaKnown RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 HUNKP57058 714 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 APBA1Q02410 837 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 FBXO16Q8IX29 292 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 COPS5Q92905 334 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 MAGEC2Q9UBF1 373 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 USP20Q9Y2K6 914 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 SCN4AP35499 1836 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 HIP1RO75146 1068 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 P4HBP07237 508 aaKnown RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 ERVK-9P63128 1117 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 ERVK-24P63145 666 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 MTF1Q14872 753 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 STXBP2Q15833 593 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 FASTKD5Q7L8L6 764 aaKnown RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 DAW1Q8N136 415 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 C2orf69Q8N8R5 385 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 CHST13Q8NET6 341 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 C16orf45Q96MC5 204 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
GGPS1-201ENST00000282841 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
GGPS1-201ENST00000282841 LCTP09848 1927 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 ARIH2O95376 493 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 OSBPP22059 807 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 XKR9Q5GH70 373 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 ODR4Q5SWX8 454 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 ANO5Q75V66 913 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 GUF1Q8N442 669 aaKnown RBP12.14□□□□□ -0.47
GGPS1-201ENST00000282841 LRRC27Q9C0I9 530 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-201ENST00000282841 TBC1D22BQ9NU19 505 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 LIMA1Q9UHB6 759 aaKnown RBP12.14□□□□□ -0.47
GGPS1-201ENST00000282841 TPM3P06753 285 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 ACTR2P61160 394 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 FILIP1LQ4L180 1135 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 TRIM50Q86XT4 487 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 ZBTB10Q96DT7 871 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 FGD4Q96M96 766 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 PCMTD1Q96MG8 357 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-201ENST00000282841 MMP19Q99542 508 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 CRACR2AQ9BSW2 395 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 NOC4LQ9BVI4 516 aaKnown RBP12.14□□□□□ -0.47
GGPS1-201ENST00000282841 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
GGPS1-201ENST00000282841 RBBP6Q7Z6E9 1792 aaKnown RBP12.14□□□□□ -0.47
GGPS1-201ENST00000282841 MYPNQ86TC9 1320 aa12.14□□□□□ -0.47
GGPS1-201ENST00000282841 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 RARRES1P49788 294 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 KCTD2Q14681 263 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 TC2NQ8N9U0 490 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 PPP1R13LQ8WUF5 828 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 DESI2Q9BSY9 194 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 TMX1Q9H3N1 280 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
GGPS1-201ENST00000282841 GYPCP04921 128 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 MARK3P27448 753 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 CASP4P49662 377 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 FAM102BQ5T8I3 360 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 LRRC55Q6ZSA7 311 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 MB21D1Q8N884 522 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 SLC9A2Q9UBY0 812 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 PCDHA10Q9Y5I2 948 aa12.13□□□□□ -0.47
GGPS1-201ENST00000282841 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 FAM170AA1A519 330 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 CLGNO14967 610 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 MIIPQ5JXC2 388 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 FAM133AQ8N9E0 248 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ATRIPQ8WXE1 791 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 GPRASP2Q96D09 838 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 KCTD10Q9H3F6 313 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms