RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 SF3B3Q15393 1217 aaKnown RBP20.35■□□□□ 0.85
SSC4D-201ENST00000275560 PPP1R7Q15435 360 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 AGBL2Q5U5Z8 902 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 POTEBQ6S5H4 581 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 KCTD10Q9H3F6 313 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 PCDHA2Q9Y5H9 948 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 SRRM3A6NNA2 597 aaPredicted RBP20.35■□□□□ 0.85
SSC4D-201ENST00000275560 FGGP02679 453 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 NR2F2P24468 414 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 CDK8P49336 464 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 BANK1Q8NDB2 785 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 GLG1Q92896 1179 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 EMILIN3Q9NT22 766 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 BHMG1C9JSJ3 638 aaPredicted RBP20.35■□□□□ 0.85
SSC4D-201ENST00000275560 LDHBP07195 334 aaKnown RBP20.35■□□□□ 0.85
SSC4D-201ENST00000275560 CHN1P15882 459 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 DPY19L2P1Q6NXN4 242 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 GPBP1Q86WP2 473 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 LRRC47Q8N1G4 583 aaKnown RBP20.35■□□□□ 0.85
SSC4D-201ENST00000275560 XPO6Q96QU8 1125 aaKnown RBP20.35■□□□□ 0.85
SSC4D-201ENST00000275560 GPCPD1Q9NPB8 672 aa20.35■□□□□ 0.85
SSC4D-201ENST00000275560 STAT3P40763 770 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 ADCY7P51828 1080 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 TCERG1LQ5VWI1 586 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 ATP8B4Q8TF62 1192 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 U2AF1L4Q8WU68 220 aaKnown RBP20.34■□□□□ 0.85
SSC4D-201ENST00000275560 TCP11Q8WWU5 503 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 MIEF2Q96C03 454 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 LZTS2Q9BRK4 669 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 PAX7P23759 505 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 ELF3P78545 371 aaPredicted RBP20.34■□□□□ 0.85
SSC4D-201ENST00000275560 ZNF211Q13398 564 aaPredicted RBP20.34■□□□□ 0.85
SSC4D-201ENST00000275560 CHMP6Q96FZ7 201 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 CEP63Q96MT8 703 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 RAB34Q9BZG1 259 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 IKZF4Q9H2S9 585 aa20.34■□□□□ 0.85
SSC4D-201ENST00000275560 SNED1Q8TER0 1413 aa20.33■□□□□ 0.85
SSC4D-201ENST00000275560 PAEPP09466 180 aa20.33■□□□□ 0.85
SSC4D-201ENST00000275560 XRCC4Q13426 336 aa20.33■□□□□ 0.85
SSC4D-201ENST00000275560 FAM133BQ5BKY9 247 aaKnown RBP20.33■□□□□ 0.85
SSC4D-201ENST00000275560 MSL1Q68DK7 614 aa20.33■□□□□ 0.85
SSC4D-201ENST00000275560 AADACL2Q6P093 401 aa20.33■□□□□ 0.85
SSC4D-201ENST00000275560 ERVK-5Q9HDB9 667 aa20.33■□□□□ 0.85
SSC4D-201ENST00000275560 DDX25Q9UHL0 483 aaKnown RBP20.33■□□□□ 0.85
SSC4D-201ENST00000275560 TRIM37O94972 964 aa20.33■□□□□ 0.84
SSC4D-201ENST00000275560 PON1P27169 355 aa20.33■□□□□ 0.84
SSC4D-201ENST00000275560 IFI35P80217 286 aaPredicted RBP20.33■□□□□ 0.84
SSC4D-201ENST00000275560 MTMR3Q13615 1198 aa20.33■□□□□ 0.84
SSC4D-201ENST00000275560 NT5DC3Q86UY8 548 aa20.33■□□□□ 0.84
SSC4D-201ENST00000275560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.33■□□□□ 0.84
SSC4D-201ENST00000275560 SLAIN2Q9P270 581 aa20.33■□□□□ 0.84
SSC4D-201ENST00000275560 SPDYE3A6NKU9 549 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 MMEP08473 750 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 PLA2G4BP0C869 781 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 ABCB4P21439 1286 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 IFNAR2P48551 515 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 PDIA5Q14554 519 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 LACTB2Q53H82 288 aaPredicted RBP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 ERMARDQ5T6L9 678 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 CALR3Q96L12 384 aaKnown RBP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 FMO2Q99518 471 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 EPB41L4BQ9H329 900 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 UTP11Q9Y3A2 253 aaKnown RBP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 DDX3XO00571 662 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 CES2O00748 559 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 SKAP2O75563 359 aaPredicted RBP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 KRT18P05783 430 aaKnown RBP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 CLTAP09496 248 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 CLNS1AP54105 237 aaKnown RBP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 DCAF12L1Q5VU92 463 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 PNMA8AQ86V59 439 aaPredicted RBP20.32■□□□□ 0.84
SSC4D-201ENST00000275560 NOD2Q9HC29 1040 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 STXBP5LQ9Y2K9 1186 aa20.32■□□□□ 0.84
SSC4D-201ENST00000275560 GFPT2O94808 682 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 ATP6V1G2O95670 118 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 EZRP15311 586 aaKnown RBP20.31■□□□□ 0.84
SSC4D-201ENST00000275560 SLCO1A2P46721 670 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 HSPA2P54652 639 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 EXOC3L4Q17RC7 722 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 TBC1D1Q86TI0 1168 aaPredicted RBP20.31■□□□□ 0.84
SSC4D-201ENST00000275560 LRRC34Q8IZ02 419 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 PPP1R9AQ9ULJ8 1098 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 PCDHA12Q9UN75 941 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 L3MBTL1Q9Y468 752 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 ABCA3Q99758 1704 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 IGSF9BQ9UPX0 1349 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 CCT8L1PA6NM43 557 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 MYCNP04198 464 aaPredicted RBP20.31■□□□□ 0.84
SSC4D-201ENST00000275560 CASP4P49662 377 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 NBPF9Q3BBW0 867 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 ARHGAP27Q6ZUM4 889 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 EIF1ADQ8N9N8 165 aaKnown RBP20.31■□□□□ 0.84
SSC4D-201ENST00000275560 CCDC26Q8TAB7 109 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 TLCD1Q96CP7 247 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 STAMBPL1Q96FJ0 436 aa20.31■□□□□ 0.84
SSC4D-201ENST00000275560 ELAC2Q9BQ52 826 aaKnown RBP20.31■□□□□ 0.84
SSC4D-201ENST00000275560 FAM129AQ9BZQ8 928 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms