RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 SMIM35A0A1B0GVV1 85 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 M0QZ92 97 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 IPO5O00410 1097 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 ADAMTS3O15072 1205 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 FAM160B1Q5W0V3 765 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 MTHFD1LQ6UB35 978 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 REXO1Q8N1G1 1221 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 NME8Q8N427 588 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 AGXT2Q9BYV1 514 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 CELF4Q9BZC1 486 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 COL4A6Q14031 1691 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 MICAL3Q7RTP6 2002 aa19.9■□□□□ 0.78
CSNK1D-201ENST00000269361 REC8O95072 547 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 KLRC1P26715 233 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 PSMA5P28066 241 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 GNA11P29992 359 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 BMPR1AP36894 532 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 NID2Q14112 1375 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 TIGD5Q53EQ6 642 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 MIS18BP1Q6P0N0 1132 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 RTN4RL1Q86UN2 441 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 BANK1Q8NDB2 785 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 ATP8B4Q8TF62 1192 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 LINC01599Q8WXQ3 324 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 PHKBQ93100 1093 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 ZNF689Q96CS4 500 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 UIMC1Q96RL1 719 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 FTHL17Q9BXU8 183 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 RC3H2Q9HBD1 1191 aaKnown RBP19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 ZNF302Q9NR11 478 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 PADI3Q9ULW8 664 aa19.89■□□□□ 0.77
CSNK1D-201ENST00000269361 ADGRA3Q8IWK6 1321 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 IGSF9BQ9UPX0 1349 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 C5orf67F2Z3F1 127 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 HBP1O60381 514 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 DGKIO75912 1065 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 RB1P06400 928 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 LINC00271P0C7V0 271 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 KCNA5P22460 613 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 CTNNB1P35222 781 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 KRT76Q01546 638 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 AKAP17AQ02040 695 aaKnown RBP19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 NTRK3Q16288 839 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 LEXMQ3ZCV2 418 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 SWSAP1Q6NVH7 229 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 PDXDC2PQ6P474 469 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 CCDC60Q8IWA6 550 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 ZNF577Q9BSK1 485 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 TBC1D22BQ9NU19 505 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 RWDD3Q9Y3V2 267 aa19.88■□□□□ 0.77
CSNK1D-201ENST00000269361 KDM3AQ9Y4C1 1321 aa19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 PPFIA3O75145 1194 aa19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 SETQ01105 290 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 PAK2Q13177 524 aa19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 BTG3Q14201 252 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 ZNF484Q5JVG2 852 aa19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 CRIPAKQ8N1N5 446 aa19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 CLP1Q92989 425 aaKnown RBP19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 C11orf84Q9BUA3 381 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-201ENST00000269361 SIP14410 1827 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 ATP4AP20648 1035 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 COL9A1P20849 921 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 PDIA3P30101 505 aaKnown RBP19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 EVCP57679 992 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 PRR16Q569H4 304 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 TCEAL5Q5H9L2 206 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 ZNF746Q6NUN9 644 aaPredicted RBP19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 KIAA0319LQ8IZA0 1049 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 BICD2Q8TD16 824 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 C1QTNF1Q9BXJ1 281 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 SLC26A6Q9BXS9 759 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 RNF26Q9BY78 433 aaPredicted RBP19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 NSUN3Q9H649 340 aaKnown RBP19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 NCOR1O75376 2440 aa19.86■□□□□ 0.77
CSNK1D-201ENST00000269361 COL1A2P08123 1366 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 ZBTB42B2RXF5 422 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 IFNAR1P17181 557 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 CIITAP33076 1130 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 CCT2P78371 535 aaKnown RBP19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 NPAS4Q8IUM7 802 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 CKAP2LQ8IYA6 745 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 CCDC148Q8NFR7 591 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 RASGRP4Q8TDF6 673 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 TMX1Q9H3N1 280 aa19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 NCOA5Q9HCD5 579 aaKnown RBP19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 MAFBQ9Y5Q3 323 aaPredicted RBP19.85■□□□□ 0.77
CSNK1D-201ENST00000269361 GRM6O15303 877 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 STAG3L1P0CL83 205 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 COL19A1Q14993 1142 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 TMEM266Q2M3C6 531 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 FAM43BQ6ZT52 329 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 RUFY3Q7L099 469 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 SMAP1Q8IYB5 467 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 CMTR2Q8IYT2 770 aaKnown RBP19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 NEK9Q8TD19 979 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 BBXQ8WY36 941 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 PLVAPQ9BX97 442 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 LMAN2LQ9H0V9 348 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 CDHR5Q9HBB8 845 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms