RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 RPAINQ86UA6 219 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 NOSTRINQ8IVI9 506 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 RDM1Q8NG50 284 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 TNPO1Q92973 898 aaKnown RBP9.5□□□□□ -0.89
ERCC8-201ENST00000265038 MTMR9Q96QG7 549 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 OSBPL7Q9BZF2 842 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 TMEM60Q9H2L4 133 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
ERCC8-201ENST00000265038 TUBE1Q9UJT0 475 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 KIF3AQ9Y496 699 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.5□□□□□ -0.89
ERCC8-201ENST00000265038 IGSF9BQ9UPX0 1349 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 RSPH10B2B2RC85 870 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 STBD1O95210 358 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 CXCL10P02778 98 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 PFKMP08237 780 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 RSPH10BP0C881 870 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 MCM7P33993 719 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 ZNF174Q15697 407 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 TCTN1Q2MV58 587 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 FAM26DQ5JW98 314 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 TAF2Q6P1X5 1199 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 MTHFD1LQ6UB35 978 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 OTOP2Q7RTS6 562 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 TRMT1LQ7Z2T5 733 aaKnown RBP9.49□□□□□ -0.89
ERCC8-201ENST00000265038 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 BBXQ8WY36 941 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-201ENST00000265038 PCDHA2Q9Y5H9 948 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 MARCH6O60337 910 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 NEMFO60524 1076 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 CAND2O75155 1236 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 BAG4O95429 457 aaKnown RBP9.49□□□□□ -0.89
ERCC8-201ENST00000265038 PARNO95453 639 aaKnown RBP9.49□□□□□ -0.89
ERCC8-201ENST00000265038 CHRNA1P02708 482 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 CTSHP09668 335 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 KLRC1P26715 233 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 TOB1P50616 345 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-201ENST00000265038 GNL2Q13823 731 aaKnown RBP9.49□□□□□ -0.89
ERCC8-201ENST00000265038 CALCRLQ16602 461 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 ZNF484Q5JVG2 852 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 SLFN12Q8IYM2 578 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 DNAJB3Q8WWF6 145 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 SNX21Q969T3 373 aa9.49□□□□□ -0.89
ERCC8-201ENST00000265038 FTOQ9C0B1 505 aaKnown RBP eCLIP9.49□□□□□ -0.89
ERCC8-201ENST00000265038 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 OATP04181 439 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 TXKP42681 527 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 PRKCEQ02156 737 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 MGAT3Q09327 533 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 NBR1Q14596 966 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 EPHA7Q15375 998 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 LARP1BQ659C4 914 aaKnown RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 FAM109BQ6ICB4 259 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 C4orf32Q8N8J7 132 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 BANK1Q8NDB2 785 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 NRBP2Q9NSY0 501 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 WRAP73Q9P2S5 460 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 COL1A2P08123 1366 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 MYH7BA7E2Y1 1941 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 SMIM35A0A1B0GVV1 85 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 C22orf31O95567 290 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 TRAPPC10P48553 1259 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 PSMC5P62195 406 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 TARBP2Q15633 366 aaKnown RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 TTC38Q5R3I4 469 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 NCAPH2Q6IBW4 605 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 KIAA0319LQ8IZA0 1049 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 FAM167AQ96KS9 214 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 CEP89Q96ST8 783 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 FAM49AQ9H0Q0 323 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 TTC12Q9H892 705 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-201ENST00000265038 PCDHA12Q9UN75 941 aa9.48□□□□□ -0.89
ERCC8-201ENST00000265038 DOCK5Q9H7D0 1870 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 TMEM150BA6NC51 233 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 GRXCR1A8MXD5 290 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 H3BQV1 296 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
ERCC8-201ENST00000265038 SMAD3P84022 425 aaKnown RBP9.47□□□□□ -0.89
ERCC8-201ENST00000265038 ORC2Q13416 577 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-201ENST00000265038 PLEKHG4Q58EX7 1191 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 XKR3Q5GH77 459 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 CNKSR3Q6P9H4 555 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 RSPH3Q86UC2 560 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 DBF4BQ8NFT6 615 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
ERCC8-201ENST00000265038 DYDC2Q96IM9 177 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 NIFKQ9BYG3 293 aaKnown RBP9.47□□□□□ -0.89
ERCC8-201ENST00000265038 RGL1Q9NZL6 768 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 NOL7Q9UMY1 257 aaKnown RBP9.47□□□□□ -0.89
ERCC8-201ENST00000265038 PCDHB6Q9Y5E3 794 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 CDY2AQ9Y6F7 541 aa9.47□□□□□ -0.89
ERCC8-201ENST00000265038 CEP290O15078 2479 aa9.46□□□□□ -0.89
ERCC8-201ENST00000265038 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.89
ERCC8-201ENST00000265038 ZBBXA8MT70 800 aa9.46□□□□□ -0.89
ERCC8-201ENST00000265038 SLITRK3O94933 977 aa9.46□□□□□ -0.89
ERCC8-201ENST00000265038 ACTN1P12814 892 aa9.46□□□□□ -0.89
ERCC8-201ENST00000265038 QARSP47897 775 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms