RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CD58P19256 250 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 ANTXR2P58335 489 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 NEDD9Q14511 834 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 SGO2Q562F6 1265 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 GKAP1Q5VSY0 366 aaPredicted RBP15.15■□□□□ 0.02
CDH3-201ENST00000264012 RINT1Q6NUQ1 792 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 DNAJC24Q6P3W2 148 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 AFAP1L2Q8N4X5 818 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
CDH3-201ENST00000264012 PDLIM2Q96JY6 352 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 EPB41L4AQ9HCS5 686 aaPredicted RBP15.15■□□□□ 0.02
CDH3-201ENST00000264012 FBXO40Q9UH90 709 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 CCDC151A5D8V7 595 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 MCPH1Q8NEM0 835 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 NLRP4Q96MN2 994 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
CDH3-201ENST00000264012 FLT1P17948 1338 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 CHRNA5P30532 468 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 MKRN3Q13064 507 aaKnown RBP15.14■□□□□ 0.01
CDH3-201ENST00000264012 STXBP2Q15833 593 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 KCTD16Q68DU8 428 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 SLFN12LQ6IEE8 588 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 TOGARAM2Q6ZUX3 1019 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 NSUN6Q8TEA1 469 aaKnown RBP15.14■□□□□ 0.01
CDH3-201ENST00000264012 OSBPL5Q9H0X9 879 aaPredicted RBP15.14■□□□□ 0.01
CDH3-201ENST00000264012 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 IQGAP1P46940 1657 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 KRT76Q01546 638 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 RFX6Q8HWS3 928 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 MTMR4Q9NYA4 1195 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 CCDC144BQ3MJ40 725 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 PPP1R16BQ96T49 567 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 PARD6BQ9BYG5 372 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 PLTPP55058 493 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 PPP2R5CQ13362 524 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 SDCCAG8Q86SQ7 713 aaPredicted RBP15.14■□□□□ 0.01
CDH3-201ENST00000264012 BCAS4Q8TDM0 211 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 CEP72Q9P209 647 aa15.14■□□□□ 0.01
CDH3-201ENST00000264012 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 HSPA6P17066 643 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 STAT3P40763 770 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 USP11P51784 963 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 SURF1Q15526 300 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 BARGINQ6ZT62 677 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 XXYLT1Q8NBI6 393 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.13■□□□□ 0.01
CDH3-201ENST00000264012 DNAJC12Q9UKB3 198 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 SGK1O00141 431 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 TROVE2P10155 538 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDH3-201ENST00000264012 SNX1Q13596 522 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 DHX40Q8IX18 779 aaKnown RBP15.13■□□□□ 0.01
CDH3-201ENST00000264012 CACNA2D3Q8IZS8 1091 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 GUF1Q8N442 669 aaKnown RBP15.13■□□□□ 0.01
CDH3-201ENST00000264012 ARHGEF2Q92974 986 aaKnown RBP15.13■□□□□ 0.01
CDH3-201ENST00000264012 SNX25Q9H3E2 840 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 PNMA3Q9UL41 463 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 FBXO33Q7Z6M2 555 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 PHLDB2Q86SQ0 1253 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
CDH3-201ENST00000264012 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 NEK9Q8TD19 979 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 PHF20Q9BVI0 1012 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 ATP6V0A4Q9HBG4 840 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 MED7O43513 233 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 ECEL1O95672 775 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 KCNH2Q12809 1159 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 KNOP1Q1ED39 458 aaKnown RBP15.13■□□□□ 0.01
CDH3-201ENST00000264012 MAD1L1Q9Y6D9 718 aa15.13■□□□□ 0.01
CDH3-201ENST00000264012 IPO5O00410 1097 aaKnown RBP15.12■□□□□ 0.01
CDH3-201ENST00000264012 GMNNO75496 209 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 STRIP1Q5VSL9 837 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 RPF1Q9H9Y2 349 aaKnown RBP15.12■□□□□ 0.01
CDH3-201ENST00000264012 DIP2BQ9P265 1576 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 CEP170BQ9Y4F5 1589 aaPredicted RBP15.12■□□□□ 0.01
CDH3-201ENST00000264012 TEX33O43247 280 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 KRT1P04264 644 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 P4HBP07237 508 aaKnown RBP15.12■□□□□ 0.01
CDH3-201ENST00000264012 EN1Q05925 392 aaPredicted RBP15.12■□□□□ 0.01
CDH3-201ENST00000264012 KLHL14Q9P2G3 628 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 QARSP47897 775 aaKnown RBP15.12■□□□□ 0.01
CDH3-201ENST00000264012 YWHAGP61981 247 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDH3-201ENST00000264012 RILPQ96NA2 401 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 IFT122Q9HBG6 1241 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
CDH3-201ENST00000264012 SPATA31A5Q5VU36 1347 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 SPATA31A7Q8IWB4 1347 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 SCARA5Q6ZMJ2 495 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 THNSL1Q8IYQ7 743 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 ATP8A1Q9Y2Q0 1164 aa15.12■□□□□ 0.01
CDH3-201ENST00000264012 SPATA31A6Q5VVP1 1343 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 LDHAP00338 332 aaKnown RBP15.11■□□□□ 0.01
CDH3-201ENST00000264012 GCLMP48507 274 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 MYO1EQ12965 1108 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 SLC16A4O15374 487 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 BUB1BO60566 1050 aaPredicted RBP15.11■□□□□ 0.01
CDH3-201ENST00000264012 ARHGAP24Q8N264 748 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 KAZALD1Q96I82 304 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms