RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 NHSQ6T4R5 1651 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 NR3C1P04150 777 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 TNNC1P63316 161 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 MEA1Q16626 185 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 Q4G0T1 1027 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 TTC19Q6DKK2 380 aaPredicted RBP17.8■□□□□ 0.44
CTCF-201ENST00000264010 REEP2Q9BRK0 252 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 ABCB6Q9NP58 842 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 RGL1Q9NZL6 768 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 A0A1B0GUL6 1792 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 STAT1P42224 750 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 NOVP48745 357 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
CTCF-201ENST00000264010 SYT2Q8N9I0 419 aaPredicted RBP17.79■□□□□ 0.44
CTCF-201ENST00000264010 ZNF341Q9BYN7 854 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 TUFT1Q9NNX1 390 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 SSU72P8A0A1W2PR75 194 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 SFI1A8K8P3 1242 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 PDXKO00764 312 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 RPS6KA1Q15418 735 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 FRMD5Q7Z6J6 570 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 VCPKMTQ9H867 229 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 MLXIPQ9HAP2 919 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
CTCF-201ENST00000264010 CEP83Q9Y592 693 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 GOLGA6L10A0A0M3HER8 536 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 NDUFAB1O14561 156 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 MSH4O15457 936 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 HERVK_113P62684 666 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 HLTFQ14527 1009 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTCF-201ENST00000264010 CEP55Q53EZ4 464 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 CIAPIN1Q6FI81 312 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 TATDN1Q6P1N9 297 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 USP37Q86T82 979 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 KCTD17Q8N5Z5 321 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 PDE11AQ9HCR9 933 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 GJA3Q9Y6H8 435 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 ARHGAP25P42331 645 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 CCDC113Q9H0I3 377 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 PICK1Q9NRD5 415 aa17.79■□□□□ 0.44
CTCF-201ENST00000264010 MAST2Q6P0Q8 1798 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 A0A0U1RQJ8 604 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 GFPT1Q06210 699 aaPredicted RBP17.78■□□□□ 0.44
CTCF-201ENST00000264010 E2F5Q15329 346 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 ACER1Q8TDN7 264 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 POLR3CQ9BUI4 534 aaPredicted RBP17.78■□□□□ 0.44
CTCF-201ENST00000264010 POLD4Q9HCU8 107 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 KCNMB3Q9NPA1 279 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 CYP3A7-CYP3A51PA0A087WV96 503 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 HSF2BPO75031 334 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 TNFAIP3P21580 790 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 CYP3A7P24462 503 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 ARHGAP27Q6ZUM4 889 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 LDHDQ86WU2 507 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 RNF10Q8N5U6 811 aaKnown RBP17.78■□□□□ 0.44
CTCF-201ENST00000264010 HOOK2Q96ED9 719 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 ADAMTS1Q9UHI8 967 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 K7ENM7 598 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 FECHP22830 423 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 ECE1P42892 770 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 CLK2P49760 499 aaKnown RBP17.78■□□□□ 0.44
CTCF-201ENST00000264010 RDH13Q8NBN7 331 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 ZNRF3Q9ULT6 936 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
CTCF-201ENST00000264010 H2AFZP0C0S5 128 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 SMTNP53814 917 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 MIIPQ5JXC2 388 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 C10orf76Q5T2E6 689 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 AP1ARQ63HQ0 302 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 H2AFVQ71UI9 128 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 DNAJC19Q96DA6 116 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 SEL1LQ9UBV2 794 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 TMX2Q9Y320 296 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 MEIS2O14770 477 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 MTMR8Q96EF0 704 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.77■□□□□ 0.44
CTCF-201ENST00000264010 GCNT4Q9P109 453 aa17.77■□□□□ 0.44
CTCF-201ENST00000264010 FERP16591 822 aa17.77■□□□□ 0.43
CTCF-201ENST00000264010 CCT5P48643 541 aa17.77■□□□□ 0.43
CTCF-201ENST00000264010 PRPF4BQ13523 1007 aaKnown RBP17.77■□□□□ 0.43
CTCF-201ENST00000264010 U2AF1L4Q8WU68 220 aaKnown RBP17.77■□□□□ 0.43
CTCF-201ENST00000264010 IWS1Q96ST2 819 aa17.77■□□□□ 0.43
CTCF-201ENST00000264010 LACRTQ9GZZ8 138 aa17.77■□□□□ 0.43
CTCF-201ENST00000264010 EXOC7Q9UPT5 735 aa17.77■□□□□ 0.43
CTCF-201ENST00000264010 NAV1Q8NEY1 1877 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 WDR59Q6PJI9 974 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 SCFD1Q8WVM8 642 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 RNF14Q9UBS8 474 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 SYNPO2Q9UMS6 1093 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 CCDC169A6NNP5 214 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 PLEKP08567 350 aaPredicted RBP17.76■□□□□ 0.43
CTCF-201ENST00000264010 ACTN2P35609 894 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 USP14P54578 494 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 EPHA7Q15375 998 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 IFT20Q8IY31 132 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 NEK9Q8TD19 979 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 CTNNBL1Q8WYA6 563 aaPredicted RBP17.76■□□□□ 0.43
CTCF-201ENST00000264010 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms