RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 VCPKMTQ9H867 229 aa10.43□□□□□ -0.74
SIM1-201ENST00000262901 PCDHA12Q9UN75 941 aa10.43□□□□□ -0.74
SIM1-201ENST00000262901 RABL2BQ9UNT1 228 aa10.43□□□□□ -0.74
SIM1-201ENST00000262901 FAN1Q9Y2M0 1017 aa10.43□□□□□ -0.74
SIM1-201ENST00000262901 TEX33O43247 280 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 SPOPO43791 374 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PEX14O75381 377 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 SETSIPP0DME0 302 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 HARSP12081 509 aaKnown RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 TNFAIP3P21580 790 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 ELF1P32519 619 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 GUCY1A2P33402 732 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 POLR2FP61218 127 aaKnown RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 NYAP1Q6ZVC0 841 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 IFT20Q8IY31 132 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 MRRFQ96E11 262 aaKnown RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 SLC10A4Q96EP9 437 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PAGE5Q96GU1 130 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 DUSP9Q99956 384 aaKnown RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 PLVAPQ9BX97 442 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 AMNQ9BXJ7 453 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 TAF1DQ9H5J8 278 aaPredicted RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 RRAGCQ9HB90 399 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 SNED1Q8TER0 1413 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 ASTN2O75129 1339 aaPredicted RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 IPO5O00410 1097 aaKnown RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 CTDNEP1O95476 244 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PTPREP23469 700 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PABPC4Q13310 644 aaKnown RBP eCLIP10.42□□□□□ -0.74
SIM1-201ENST00000262901 RPS6KA1Q15418 735 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PFKFB3Q16875 520 aaPredicted RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 GSTA5Q7RTV2 222 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 CPXCR1Q8N123 301 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 LPAR1Q92633 364 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 KIF9Q9HAQ2 790 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 RASAL2Q9UJF2 1139 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PNMA6FA0A0J9YX94 578 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 KCNK3O14649 394 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 SNUPNO95149 360 aaKnown RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 SLURP2P0DP57 97 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 TPP2P29144 1249 aaPredicted RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 INPP5BP32019 993 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 CA8P35219 290 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 MTF1Q14872 753 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PPP1R7Q15435 360 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 NAA35Q5VZE5 725 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 GADL1Q6ZQY3 521 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 DPH6Q7L8W6 267 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 MYOCDQ8IZQ8 938 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 MYCT1Q8N699 235 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 ZNF280CQ8ND82 737 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 MRPL44Q9H9J2 332 aaKnown RBP10.42□□□□□ -0.74
SIM1-201ENST00000262901 DOCK2Q92608 1830 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 PHLPP2Q6ZVD8 1323 aa10.42□□□□□ -0.74
SIM1-201ENST00000262901 ZSCAN9O15535 394 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 VIMP08670 466 aaKnown RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 PRELPP51888 382 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 TMEM62Q0P6H9 643 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 RESP18Q5W5W9 173 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 HAUS3Q68CZ6 603 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 PEX26Q7Z412 305 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 GPBP1Q86WP2 473 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 FMNL3Q8IVF7 1028 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 ANKRD13AQ8IZ07 590 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 TRIM58Q8NG06 486 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 ZBED3Q96IU2 234 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 PPANQ9NQ55 473 aaKnown RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 SPATS2LQ9NUQ6 558 aaKnown RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 FEM1BQ9UK73 627 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 DNM3Q9UQ16 869 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 PCDHA1Q9Y5I3 950 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 PALM3A6NDB9 673 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 TRIM49BA6NDI0 452 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 EHHADHQ08426 723 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 KRT31Q15323 416 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 BCAS4Q8TDM0 211 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 SMCR8Q8TEV9 937 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 FAM204AQ9H8W3 233 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 SYNPO2Q9UMS6 1093 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 TMX2Q9Y320 296 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 C19orf81C9J6K1 198 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 AP5Z1O43299 807 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 LONP1P36776 959 aaKnown RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 GNGT1P63211 74 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 CALCOCO2Q13137 446 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 LLGL1Q15334 1064 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 KSR1Q8IVT5 923 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 TRIM42Q8IWZ5 723 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 NEK9Q8TD19 979 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 ACER1Q8TDN7 264 aa10.41□□□□□ -0.74
SIM1-201ENST00000262901 N4BP2L2Q92802 583 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 ZKSCAN4Q969J2 545 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 JPH2Q9BR39 696 aaPredicted RBP10.41□□□□□ -0.74
SIM1-201ENST00000262901 GLIS2Q9BZE0 524 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms