RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 AFMP43652 599 aa30.72■■■□□ 2.51
SMARCD3-201ENST00000262188 IQUBQ8NA54 791 aa30.72■■■□□ 2.51
SMARCD3-201ENST00000262188 GZF1Q9H116 711 aaPredicted RBP30.72■■■□□ 2.51
SMARCD3-201ENST00000262188 TUFT1Q9NNX1 390 aa30.72■■■□□ 2.51
SMARCD3-201ENST00000262188 QARSP47897 775 aaKnown RBP30.72■■■□□ 2.51
SMARCD3-201ENST00000262188 MCM6Q14566 821 aa30.72■■■□□ 2.51
SMARCD3-201ENST00000262188 KDM3AQ9Y4C1 1321 aa30.71■■■□□ 2.51
SMARCD3-201ENST00000262188 MYADML2A6NDP7 307 aa30.71■■■□□ 2.51
SMARCD3-201ENST00000262188 BEX3Q00994 111 aa30.71■■■□□ 2.51
SMARCD3-201ENST00000262188 NRBP1Q9UHY1 535 aa30.71■■■□□ 2.51
SMARCD3-201ENST00000262188 SEPT4O43236 478 aa30.7■■■□□ 2.51
SMARCD3-201ENST00000262188 PRR29P0C7W0 189 aa30.7■■■□□ 2.51
SMARCD3-201ENST00000262188 CTCFP49711 727 aaPredicted RBP30.7■■■□□ 2.51
SMARCD3-201ENST00000262188 RDM1Q8NG50 284 aa30.7■■■□□ 2.51
SMARCD3-201ENST00000262188 EMID1Q96A84 441 aaPredicted RBP30.7■■■□□ 2.51
SMARCD3-201ENST00000262188 ZNF302Q9NR11 478 aa30.7■■■□□ 2.51
SMARCD3-201ENST00000262188 PGK1P00558 417 aa30.7■■■□□ 2.5
SMARCD3-201ENST00000262188 SLFN14P0C7P3 912 aa30.7■■■□□ 2.5
SMARCD3-201ENST00000262188 ZNF286BP0CG31 522 aa30.7■■■□□ 2.5
SMARCD3-201ENST00000262188 ATP4AP20648 1035 aa30.7■■■□□ 2.5
SMARCD3-201ENST00000262188 MARK3P27448 753 aa30.7■■■□□ 2.5
SMARCD3-201ENST00000262188 PPTC7Q8NI37 304 aa30.7■■■□□ 2.5
SMARCD3-201ENST00000262188 CLSTN2Q9H4D0 955 aa30.7■■■□□ 2.5
SMARCD3-201ENST00000262188 NKRFO15226 690 aaKnown RBP eCLIP30.69■■■□□ 2.5
SMARCD3-201ENST00000262188 SSBP05455 408 aaKnown RBP eCLIP30.69■■■□□ 2.5
SMARCD3-201ENST00000262188 PSMC5P62195 406 aa30.69■■■□□ 2.5
SMARCD3-201ENST00000262188 CEP57L1Q8IYX8 460 aa30.69■■■□□ 2.5
SMARCD3-201ENST00000262188 RAD54LQ92698 747 aa30.69■■■□□ 2.5
SMARCD3-201ENST00000262188 NT5C3AQ9H0P0 336 aa30.69■■■□□ 2.5
SMARCD3-201ENST00000262188 ZSWIM4Q9H7M6 989 aa30.69■■■□□ 2.5
SMARCD3-201ENST00000262188 IGKV6D-21A0A0A0MT36 114 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 MMP3P08254 477 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 PLA2G4FQ68DD2 849 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 PAGE5Q96GU1 130 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 NUP62CLQ9H1M0 184 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 PNOCQ13519 176 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 CKAP2LQ8IYA6 745 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 NEK9Q8TD19 979 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 PPP1R13LQ8WUF5 828 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 LARP4BQ92615 738 aaKnown RBP30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 BLZF1Q9H2G9 400 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 IGSF9BQ9UPX0 1349 aa30.68■■■□□ 2.5
SMARCD3-201ENST00000262188 PRKCEQ02156 737 aa30.67■■■□□ 2.5
SMARCD3-201ENST00000262188 GLG1Q92896 1179 aa30.67■■■□□ 2.5
SMARCD3-201ENST00000262188 BHMT2Q9H2M3 363 aa30.67■■■□□ 2.5
SMARCD3-201ENST00000262188 STK24Q9Y6E0 443 aa30.67■■■□□ 2.5
SMARCD3-201ENST00000262188 UQCRHLA0A096LP55 91 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 CTAGE5O15320 804 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 MYCNP04198 464 aaPredicted RBP30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 UQCRHP07919 91 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 STAT5BP51692 787 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 AP5M1Q9H0R1 490 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 TMEM51Q9NW97 253 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 DNM3Q9UQ16 869 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 MAFBQ9Y5Q3 323 aaPredicted RBP30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 SYNRGQ9UMZ2 1314 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 DUSP11O75319 330 aaKnown RBP30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 STBD1O95210 358 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 LGALS2P05162 132 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 PLA2G4BP0C869 781 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 SLC9C1Q4G0N8 1177 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 CTU1Q7Z7A3 348 aaKnown RBP30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 TIGD1Q96MW7 591 aa30.66■■■□□ 2.5
SMARCD3-201ENST00000262188 MYH9P35579 1960 aaKnown RBP30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 C6orf222P0C671 652 aaPredicted RBP30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 RARBP10826 455 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 YWHABP31946 246 aaKnown RBP30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 NPEPPSP55786 919 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 MTFR1Q15390 333 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 CCDC183Q5T5S1 534 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 ANO5Q75V66 913 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 ATP6V0A1Q93050 837 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 TNMDQ9H2S6 317 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 POLD4Q9HCU8 107 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 STK17AQ9UEE5 414 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 LGR5O75473 907 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 MDM2Q00987 491 aaPredicted RBP30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 C4orf19Q8IY42 314 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 AZI2Q9H6S1 392 aa30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 BMP2KQ9NSY1 1161 aaPredicted RBP30.65■■■□□ 2.5
SMARCD3-201ENST00000262188 NPHP3-ACAD11A0A0J9YXS1 232 aa30.64■■■□□ 2.5
SMARCD3-201ENST00000262188 A6NJR5 290 aa30.64■■■□□ 2.5
SMARCD3-201ENST00000262188 RAD51AP2Q09MP3 1159 aa30.64■■■□□ 2.5
SMARCD3-201ENST00000262188 CUL4BQ13620 913 aa30.64■■■□□ 2.5
SMARCD3-201ENST00000262188 SH3RF1Q7Z6J0 888 aa30.64■■■□□ 2.5
SMARCD3-201ENST00000262188 NACC1Q96RE7 527 aa30.64■■■□□ 2.5
SMARCD3-201ENST00000262188 UNC93B1Q9H1C4 597 aa30.64■■■□□ 2.5
SMARCD3-201ENST00000262188 CHMP4BP1P59074 171 aa30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 FSCN1Q16658 493 aaKnown RBP30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 C16orf70Q9BSU1 422 aa30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 HMX1Q9NP08 348 aaPredicted RBP30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 XPNPEP3Q9NQH7 507 aa30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 KBTBD4Q9NVX7 518 aa30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 SEPT9Q9UHD8 586 aaPredicted RBP30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 DDX20Q9UHI6 824 aaKnown RBP30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 SLC12A3P55017 1021 aa30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 FAM160B1Q5W0V3 765 aa30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 PYM1Q9BRP8 204 aaKnown RBP30.63■■■□□ 2.49
SMARCD3-201ENST00000262188 MYMKA6NI61 221 aa30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 SLC26A4O43511 780 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms