RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 RUSC1Q9BVN2 902 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 LUC7LQ9NQ29 371 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 GDF3Q9NR23 364 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 EXOC3L4Q17RC7 722 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 ARHGAP27Q6ZUM4 889 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 CAVIN3Q969G5 261 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 CAPS2Q9BXY5 557 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 MYO3BQ8WXR4 1341 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 F5H6K3 240 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 RAD51CO43502 376 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 CCT5P48643 541 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 ATP1A2P50993 1020 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 GNGT1P63211 74 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 PPARDQ03181 441 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 KLRC3Q07444 240 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 HHIPL2Q6UWX4 724 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 SYT2Q8N9I0 419 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 PIGOQ8TEQ8 1089 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 MBOAT7Q96N66 472 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 PITPNM2Q9BZ72 1349 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 EML1O00423 815 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 ZBTB39O15060 712 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 AFPP02771 609 aaKnown RBP17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 RPA1P27694 616 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 HOXA7P31268 230 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 JAG1P78504 1218 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 RUBCNQ92622 972 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 CCDC17Q96LX7 622 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 NAP1L4Q99733 375 aaKnown RBP17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 FAM198AQ9UFP1 575 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 PCDHB13Q9Y5F0 798 aa17.93■□□□□ 0.46
TM9SF1-201ENST00000261789 VGLL3A8MV65 326 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 GOLGA8KD6RF30 607 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 MSH4O15457 936 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 GCNT3O95395 438 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 ICA1Q05084 483 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 PPFIA1Q13136 1202 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 GLE1Q53GS7 698 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 KSR1Q8IVT5 923 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 AP1M1Q9BXS5 423 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 TRAF3IP3Q9Y228 551 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 GRIN2DO15399 1336 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 ZNF233A6NK53 670 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 SPDYE3A6NKU9 549 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 OPA1O60313 960 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 EPM2AIP1Q7L775 607 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 AMNQ9BXJ7 453 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 RNF14Q9UBS8 474 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 NAGPAQ9UK23 515 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 GREB1LQ9C091 1923 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 ASTN1O14525 1302 aa17.92■□□□□ 0.46
TM9SF1-201ENST00000261789 OPLAHO14841 1288 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 NR3C1P04150 777 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 TNFRSF8P28908 595 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 RPS6KA1Q15418 735 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 ALS2CLQ60I27 953 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 ALKBH5Q6P6C2 394 aaKnown RBP17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 FRMD5Q7Z6J6 570 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 BCAS4Q8TDM0 211 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 DCAF4Q8WV16 495 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 PIK3R5Q8WYR1 880 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 MKL1Q969V6 931 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 CEP104O60308 925 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 NDUFB10O96000 172 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 PDCLQ13371 301 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 CTTNQ14247 550 aaKnown RBP17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 FBXO11Q86XK2 927 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 ERMNQ8TAM6 284 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 TSPYL1Q9H0U9 437 aa17.91■□□□□ 0.46
TM9SF1-201ENST00000261789 CHMP2AO43633 222 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 AP3B2Q13367 1082 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 NNTQ13423 1086 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 EPHA7Q15375 998 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 ZC2HC1CQ53FD0 456 aaPredicted RBP17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 DDX42Q86XP3 938 aaKnown RBP eCLIP17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 IQCKQ8N0W5 287 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 GLT8D2Q9H1C3 349 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 SIX2Q9NPC8 291 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 GCNT4Q9P109 453 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 NYAP2Q9P242 653 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 KIF4AO95239 1232 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 PAK2Q13177 524 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 CFAP58Q5T655 872 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 TAF4BQ92750 862 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 SLC35C1Q96A29 364 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 EIF2AK1Q9BQI3 630 aaKnown RBP17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 PI4KBQ9UBF8 816 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 VAV3Q9UKW4 847 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 LRRC37AA6NMS7 1700 aa17.9■□□□□ 0.46
TM9SF1-201ENST00000261789 ATAD5Q96QE3 1844 aa17.89■□□□□ 0.46
TM9SF1-201ENST00000261789 PDXKO00764 312 aa17.89■□□□□ 0.45
TM9SF1-201ENST00000261789 CALUO43852 315 aaPredicted RBP17.89■□□□□ 0.45
TM9SF1-201ENST00000261789 TRIM37O94972 964 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms