RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 EXOC4Q96A65 974 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 RBM12Q9NTZ6 932 aaKnown RBP21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 RABGAP1Q9Y3P9 1069 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 STAT2P52630 851 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 RNASE9P60153 205 aaKnown RBP21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 KIAA0753Q2KHM9 967 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 ZC2HC1CQ53FD0 456 aaPredicted RBP21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 TCERG1LQ5VWI1 586 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 STYK1Q6J9G0 422 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 RINT1Q6NUQ1 792 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 GJB7Q6PEY0 223 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 RBM46Q8TBY0 533 aaKnown RBP21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 GOLPH3Q9H4A6 298 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 AIPL1Q9NZN9 384 aa21.13■□□□□ 0.97
LPCAT3-201ENST00000261407 PPIP5K2O43314 1243 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 C21orf2O43822 256 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 ENTPD3O75355 529 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 SLITRK3O94933 977 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 TCP1P17987 556 aaKnown RBP21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 PON1P27169 355 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 NMT1P30419 496 aaKnown RBP21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 PTPROQ16827 1216 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 CCDC181Q5TID7 509 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 CC2D2BQ6DHV5 1058 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 OTOP1Q7RTM1 612 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 IRF2BP2Q7Z5L9 587 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 DYDC2Q96IM9 177 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 WRAP73Q9P2S5 460 aaPredicted RBP21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 PCDHB13Q9Y5F0 798 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 FAM170AA1A519 330 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 CCDC66A2RUB6 948 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 UCHL3P15374 230 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 NAB2Q15742 525 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 ASIC2Q16515 512 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 HSP90B2PQ58FF3 399 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 ZNF572Q7Z3I7 529 aaPredicted RBP21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 ZNF571Q7Z3V5 609 aaPredicted RBP21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 HSD17B14Q9BPX1 270 aa21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 NUCKS1Q9H1E3 243 aaKnown RBP21.12■□□□□ 0.97
LPCAT3-201ENST00000261407 NR3C1P04150 777 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 GGCXP38435 758 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 KCTD19Q17RG1 926 aaPredicted RBP21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 MIGA2Q7L4E1 593 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 FRMD5Q7Z6J6 570 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 SCAF8Q9UPN6 1271 aaKnown RBP21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 ZBTB12Q9Y330 459 aaPredicted RBP21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 AGPSO00116 658 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 PDXKO00764 312 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 TGFB1I1O43294 461 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 RAD17O75943 681 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 AFPP02771 609 aaKnown RBP21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 CYP3A4P08684 503 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 XRCC5P13010 732 aaKnown RBP21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 COG2Q14746 738 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 MAP9Q49MG5 647 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 RNF10Q8N5U6 811 aaKnown RBP21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 FAM71BQ8TC56 605 aa21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 GLIS2Q9BZE0 524 aaPredicted RBP21.11■□□□□ 0.97
LPCAT3-201ENST00000261407 PIK3CDO00329 1044 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 SLC26A4O43511 780 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 RNF40O75150 1001 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 EYA4O95677 639 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 MCM3P25205 808 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 EXOC3L4Q17RC7 722 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 IQCEQ6IPM2 695 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 ARHGAP27Q6ZUM4 889 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 TXLNBQ8N3L3 684 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 AENQ8WTP8 325 aaKnown RBP21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 POLR3CQ9BUI4 534 aaPredicted RBP21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 FAM204AQ9H8W3 233 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 FBXO28Q9NVF7 368 aa21.1■□□□□ 0.97
LPCAT3-201ENST00000261407 TBCAO75347 108 aaKnown RBP21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 LRCH2Q5VUJ6 765 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 SLC35C1Q96A29 364 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 VIPAS39Q9H9C1 493 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 ZSCAN5CA6NGD5 496 aaPredicted RBP21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 CALUO43852 315 aaPredicted RBP21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 PSMD10O75832 226 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 EPHA7Q15375 998 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 MYCT1Q8N699 235 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 SPAG5Q96R06 1193 aa21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 TYW1Q9NV66 732 aaKnown RBP21.09■□□□□ 0.97
LPCAT3-201ENST00000261407 ARP10275 920 aa21.08■□□□□ 0.97
LPCAT3-201ENST00000261407 AARSP49588 968 aaKnown RBP eCLIP21.08■□□□□ 0.97
LPCAT3-201ENST00000261407 SND1Q7KZF4 910 aaKnown RBP eCLIP21.08■□□□□ 0.97
LPCAT3-201ENST00000261407 SIX2Q9NPC8 291 aa21.08■□□□□ 0.97
LPCAT3-201ENST00000261407 ZMYM2Q9UBW7 1377 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 GRID2IPA4D2P6 1211 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 SPDYE2BA6NHP3 402 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 SPDYE6P0CI01 402 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 C1orf186Q6ZWK4 172 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 TRERF1Q96PN7 1200 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 MED4Q9NPJ6 270 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 PSD3Q9NYI0 1048 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 TMX2Q9Y320 296 aa21.08■□□□□ 0.96
LPCAT3-201ENST00000261407 CAPN2P17655 700 aa21.07■□□□□ 0.96
LPCAT3-201ENST00000261407 PAFAH1B1P43034 410 aa21.07■□□□□ 0.96
LPCAT3-201ENST00000261407 ITIH3Q06033 890 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms