RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 ZNF473Q8WTR7 871 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-202ENST00000261368 CTNNBL1Q8WYA6 563 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-202ENST00000261368 AMFRQ9UKV5 643 aa17.66■□□□□ 0.42
SNCAIP-202ENST00000261368 ANKRD36CQ5JPF3 1778 aa17.66■□□□□ 0.42
SNCAIP-202ENST00000261368 TM4SF1P30408 202 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 ITIH3Q06033 890 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 TBC1D10BQ4KMP7 808 aaPredicted RBP17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 DOCK2Q92608 1830 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 SF3B2Q13435 895 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 SLFN13Q68D06 897 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 GLYCTKQ8IVS8 523 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 METTL13Q8N6R0 699 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 REEP2Q9BRK0 252 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 IKZF4Q9H2S9 585 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 RGL1Q9NZL6 768 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 BCORQ6W2J9 1755 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 HSD17B3P37058 310 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 MDH1P40925 334 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 TMEM119Q4V9L6 283 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 RUFY4Q6ZNE9 571 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 TBC1D22AQ8WUA7 517 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 TRIM51Q9BSJ1 452 aa17.65■□□□□ 0.42
SNCAIP-202ENST00000261368 SHOX2O60902 331 aaPredicted RBP17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 PPP1R11O60927 126 aaPredicted RBP17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 GDF11O95390 407 aa17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 CTTNQ14247 550 aaKnown RBP17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 KNOP1Q1ED39 458 aaKnown RBP17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 RBM17Q96I25 401 aaKnown RBP17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 SCLT1Q96NL6 688 aa17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 EPN3Q9H201 632 aa17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.42
SNCAIP-202ENST00000261368 A6NNZ2 444 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 HMGB1P1B2RPK0 211 aaPredicted RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 hCG_1984214I3L0E3 225 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 NR3C1P04150 777 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 GCFC2P16383 781 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 TNFAIP3P21580 790 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 TUBB8Q3ZCM7 444 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 ZNF713Q8N859 430 aaPredicted RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 CEP89Q96ST8 783 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 BCAS3Q9H6U6 928 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 GDF3Q9NR23 364 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 NAGPAQ9UK23 515 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 GRIN2DO15399 1336 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 RHBDL3P58872 404 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 MAGOHP61326 146 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 MKRN4PQ13434 485 aaPredicted RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 SEPT2Q15019 361 aa17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 ASTE1Q2TB18 679 aaPredicted RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 MAGOHBQ96A72 148 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-202ENST00000261368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 MEFVO15553 781 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 CFBP00751 764 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 HNRNPH1P31943 449 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 ARHGAP4P98171 946 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 KCNA1Q09470 495 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 KAT2BQ92831 832 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 SH3GL2Q99962 352 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 CHORDC1Q9UHD1 332 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 GOLGA6L10A0A0M3HER8 536 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 DDX39AO00148 427 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 HGSO14964 777 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 LRP5O75197 1615 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 LCA5LO95447 670 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 PLTPP55058 493 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 ORC2Q13416 577 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 PTGISQ16647 500 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 CATSPER3Q86XQ3 398 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 IQCKQ8N0W5 287 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 PBKQ96KB5 322 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 INPP4AQ96PE3 977 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 DDX4Q9NQI0 724 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 ABCB11O95342 1321 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 PPP4R3AQ6IN85 833 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 HS2ST1Q7LGA3 356 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 JPH2Q9BR39 696 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 PLCH1Q4KWH8 1693 aa17.63■□□□□ 0.41
SNCAIP-202ENST00000261368 TRIM49P0CI25 452 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 TRIM49CP0CI26 452 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 SHROOM1Q2M3G4 852 aaPredicted RBP17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 POLLQ9UGP5 575 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 RABGAP1Q9Y3P9 1069 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 SHANK3Q9BYB0 1731 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 AKAP3O75969 853 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 PON1P27169 355 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 NMT1P30419 496 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 SLCO1A2P46721 670 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 OSGEPQ9NPF4 335 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 CTTNBP2NLQ9P2B4 639 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 ZBTB21Q9ULJ3 1066 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 SERPINB2P05120 415 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 USP11P51784 963 aa17.62■□□□□ 0.41
SNCAIP-202ENST00000261368 ZC2HC1CQ53FD0 456 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms