RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 KIAA0753Q2KHM9 967 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 EPSTI1Q96J88 318 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 LXNQ9BS40 222 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 MAFBQ9Y5Q3 323 aaPredicted RBP23.18■■□□□ 1.3
RTCA-201ENST00000260563 ALPK3Q96L96 1907 aa23.17■■□□□ 1.3
RTCA-201ENST00000260563 A0A0U1RQG5 324 aaPredicted RBP23.17■■□□□ 1.3
RTCA-201ENST00000260563 PSMC5P62195 406 aa23.17■■□□□ 1.3
RTCA-201ENST00000260563 CYP4A11Q02928 519 aa23.17■■□□□ 1.3
RTCA-201ENST00000260563 UGCGQ16739 394 aa23.17■■□□□ 1.3
RTCA-201ENST00000260563 USP49Q70CQ1 688 aa23.17■■□□□ 1.3
RTCA-201ENST00000260563 ENGASEQ8NFI3 743 aa23.17■■□□□ 1.3
RTCA-201ENST00000260563 DYDC2Q96IM9 177 aa23.17■■□□□ 1.3
RTCA-201ENST00000260563 TRIP12Q14669 1992 aaPredicted RBP23.17■■□□□ 1.3
RTCA-201ENST00000260563 DNAH12Q6ZR08 3092 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 HAS3O00219 553 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 DKC1O60832 514 aaKnown RBP eCLIP23.16■■□□□ 1.3
RTCA-201ENST00000260563 NR1I2O75469 434 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 QARSP47897 775 aaKnown RBP23.16■■□□□ 1.3
RTCA-201ENST00000260563 SNW1Q13573 536 aaKnown RBP23.16■■□□□ 1.3
RTCA-201ENST00000260563 KRT79Q5XKE5 535 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 CKAP2LQ8IYA6 745 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 SNX29Q8TEQ0 813 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 RGL1Q9NZL6 768 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 KCNH3Q9ULD8 1083 aa23.16■■□□□ 1.3
RTCA-201ENST00000260563 PP2D1A8MPX8 630 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 TXLNAP40222 546 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 SYKP43405 635 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 PRKCEQ02156 737 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 ITGA7Q13683 1181 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 FMR1NBQ8N0W7 255 aaPredicted RBP23.15■■□□□ 1.3
RTCA-201ENST00000260563 FAM167AQ96KS9 214 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 TUFT1Q9NNX1 390 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 DACT1Q9NYF0 836 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 TRPC6Q9Y210 931 aa23.15■■□□□ 1.3
RTCA-201ENST00000260563 CDC25AP30304 524 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 UBA7P41226 1012 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 CTTNQ14247 550 aaKnown RBP23.14■■□□□ 1.3
RTCA-201ENST00000260563 PLCB4Q15147 1175 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 NBPF20Q3BBV1 942 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 UBE2Q1Q7Z7E8 422 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 TPH2Q8IWU9 490 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 HSD17B14Q9BPX1 270 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 POLR3CQ9BUI4 534 aaPredicted RBP23.14■■□□□ 1.3
RTCA-201ENST00000260563 ZSWIM4Q9H7M6 989 aa23.14■■□□□ 1.3
RTCA-201ENST00000260563 MKI67P46013 3256 aaKnown RBP23.14■■□□□ 1.29
RTCA-201ENST00000260563 POTEB3A0JP26 581 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 MED24O75448 989 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 SLITRK3O94933 977 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 OATP04181 439 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 RPA1P27694 616 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 CCT6AP40227 531 aaKnown RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 FAM47CQ5HY64 1035 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 CAVIN1Q6NZI2 390 aaKnown RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 NFRKBQ6P4R8 1299 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 POTEBQ6S5H4 581 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 TRMT1LQ7Z2T5 733 aaKnown RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 C7orf31Q8N865 590 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 ATP8B4Q8TF62 1192 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 SEZ6LQ9BYH1 1024 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 CCSER1Q9C0I3 900 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 RNPEPQ9H4A4 650 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 DDX19AQ9NUU7 478 aaKnown RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 KDM3AQ9Y4C1 1321 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 ZNF862O60290 1169 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 ZNF202O95125 648 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 ATP4AP20648 1035 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 ATN1P54259 1190 aaPredicted RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 CABP7Q86V35 215 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 CATSPER3Q86XQ3 398 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 C4orf19Q8IY42 314 aa23.13■■□□□ 1.29
RTCA-201ENST00000260563 BBXQ8WY36 941 aaPredicted RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 SYAP1Q96A49 352 aaPredicted RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 WRAP73Q9P2S5 460 aaPredicted RBP23.13■■□□□ 1.29
RTCA-201ENST00000260563 GRIN2DO15399 1336 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 ARVCFO00192 962 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 HBP1O60381 514 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 KINO60870 393 aaKnown RBP23.12■■□□□ 1.29
RTCA-201ENST00000260563 SPATA31C1P0DKV0 1188 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 SMIM10L2AP0DMW4 78 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 SMIM10L2BP0DMW5 78 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 SLC39A5Q6ZMH5 540 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 PPP1R13LQ8WUF5 828 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 TMEM63CQ9P1W3 806 aa23.12■■□□□ 1.29
RTCA-201ENST00000260563 SEPT9Q9UHD8 586 aaPredicted RBP23.12■■□□□ 1.29
RTCA-201ENST00000260563 MROH7Q68CQ1 1323 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 POLR2DO15514 142 aaKnown RBP23.11■■□□□ 1.29
RTCA-201ENST00000260563 MUTP22033 750 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 PTPN11Q06124 597 aaPredicted RBP23.11■■□□□ 1.29
RTCA-201ENST00000260563 PPFIA1Q13136 1202 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 XKR3Q5GH77 459 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 POTEGQ6S5H5 508 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 SESTD1Q86VW0 696 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 PDILTQ8N807 584 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 SLC43A3Q8NBI5 491 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 RASSF8Q8NHQ8 419 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 CDK5RAP3Q96JB5 506 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 PYM1Q9BRP8 204 aaKnown RBP23.11■■□□□ 1.29
RTCA-201ENST00000260563 MMTAG2Q9BU76 263 aaKnown RBP23.11■■□□□ 1.29
RTCA-201ENST00000260563 PANK2Q9BZ23 570 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 NRBP2Q9NSY0 501 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms