RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ZNF609O15014 1411 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PPFIA3O75145 1194 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 RAD51Q06609 339 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 ME3Q16798 604 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 ILDR1Q86SU0 546 aaPredicted RBP14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 ZSCAN30Q86W11 494 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 ARHGAP18Q8N392 663 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 IGSF22Q8N9C0 903 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 ST7Q9NRC1 585 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PCDHB4Q9Y5E5 795 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 SRPRBQ9Y5M8 271 aaKnown RBP14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PVALEFA0A1B0GWK0 134 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PNPLA4P41247 253 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 APLP1P51693 650 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 FKBP3Q00688 224 aaKnown RBP14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 CEP55Q53EZ4 464 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 APPL2Q8NEU8 664 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 GMCL1Q96IK5 515 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 C17orf75Q9HAS0 396 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 H0YHG0 523 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 DYNC1LI2O43237 492 aaPredicted RBP14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 OPA1O60313 960 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 ADCY5O95622 1261 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 AMHP03971 560 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 UQCRHP07919 91 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 AKR1B1P15121 316 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 ARL1P40616 181 aaPredicted RBP14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 STX17P56962 302 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 ITIH3Q06033 890 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 DRP2Q13474 957 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 SKIDA1Q1XH10 827 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 ZSCAN23Q3MJ62 389 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 KANSL3Q9P2N6 904 aa14.58□□□□□ -0.07
PRPF38A-201ENST00000257181 DISP2A7MBM2 1401 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 SLC15A5A6NIM6 579 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 ARL4AP40617 200 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 MAPRE1Q15691 268 aaKnown RBP14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 ESYT2A0FGR8 921 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 RPS6KA5O75582 802 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 EGFRP00533 1210 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 GNG11P61952 73 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 RASSF7Q02833 373 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 ZNF568Q3ZCX4 644 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 MRPL9Q9BYD2 267 aaKnown RBP14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 PRMT7Q9NVM4 692 aaPredicted RBP14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 GSG1L2A8MUP6 293 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 ZBTB48P10074 688 aaPredicted RBP14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 DLATP10515 647 aaKnown RBP14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 TGFB3P10600 412 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 NR1H3Q13133 447 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 PDIA5Q14554 519 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 ISM2Q6H9L7 571 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 MOXD1Q6UVY6 613 aa14.58□□□□□ -0.08
PRPF38A-201ENST00000257181 IPO5O00410 1097 aaKnown RBP14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 NDUFB10O96000 172 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 LRRC31Q6UY01 552 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 TOGARAM2Q6ZUX3 1019 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 STKLD1Q8NE28 680 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 IDI2Q9BXS1 227 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 DNAJC25Q9H1X3 360 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 SERTAD1Q9UHV2 236 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 CRCPO75575 148 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 SLC12A2P55011 1212 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 CYP4A11Q02928 519 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 LSM14BQ9BX40 385 aaKnown RBP14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 ZBTB12Q9Y330 459 aaPredicted RBP14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 SCINQ9Y6U3 715 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 EXOC3L4Q17RC7 722 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 SDE2Q6IQ49 451 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 SHCBP1Q8NEM2 672 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 CCDC68Q9H2F9 335 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 SLITRK6Q9H5Y7 841 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 STARD7Q9NQZ5 370 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 TFAMQ00059 246 aaKnown RBP14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 CFAP157Q5JU67 520 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 CCHCR1Q8TD31 782 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 P3H4Q92791 437 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 ANKEF1Q9NU02 776 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 BTBD18B2RXH4 712 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 TBC1D12O60347 775 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 ZNF746Q6NUN9 644 aaPredicted RBP14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 PADI6Q6TGC4 694 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 CCDC89Q8N998 374 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 ACAP3Q96P50 834 aa14.57□□□□□ -0.08
PRPF38A-201ENST00000257181 EIF3DO15371 548 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 GGPS1O95749 300 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 NR3C2P08235 984 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 SRGAP2CP0DJJ0 459 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 GNASQ5JWF2 1037 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 SYMPKQ92797 1274 aaKnown RBP14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 FAM107BQ9H098 131 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 PDHXO00330 501 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 MORC3Q14149 939 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 ZNF658Q5TYW1 1059 aaPredicted RBP14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 GDPD2Q9HCC8 539 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 HPCAL4Q9UM19 191 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms