RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 SCFD2Q8WU76 684 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 PBKQ96KB5 322 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 GLT8D2Q9H1C3 349 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 ISCUQ9H1K1 167 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 PLAAQ9Y263 795 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 BZW2Q9Y6E2 419 aaKnown RBP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 AKAP3O75969 853 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 SPATA31C1P0DKV0 1188 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 NR1D1P20393 614 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 ECHS1P30084 290 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 HLTFQ14527 1009 aaKnown RBP eCLIP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 MEIS2O14770 477 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 XRCC5P13010 732 aaKnown RBP18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 LSP1P33241 339 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 ARHGAP4P98171 946 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 EPHA7Q15375 998 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 CDC42EP5Q6NZY7 148 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 MAATS1Q7Z4T9 603 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 SYT2Q8N9I0 419 aaPredicted RBP18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 ACTRT1Q8TDG2 376 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 ATP6V1G3Q96LB4 118 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 AP1M1Q9BXS5 423 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 BCAS3Q9H6U6 928 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 DNM3Q9UQ16 869 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 ZBTB48P10074 688 aaPredicted RBP18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 GYS1P13807 737 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 CEP85LQ5SZL2 805 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 EMC10Q5UCC4 262 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 DDX42Q86XP3 938 aaKnown RBP eCLIP18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 TPCN2Q8NHX9 752 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 CRYGNQ8WXF5 182 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 SIX2Q9NPC8 291 aa18.69■□□□□ 0.58
SLC52A1-201ENST00000254853 RSPH10B2B2RC85 870 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 CALUO43852 315 aaPredicted RBP18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 ERLIN2O94905 339 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 HLA-DOAP06340 250 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 RSPH10BP0C881 870 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 PRKCIP41743 596 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 CASP4P49662 377 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 SNAP25P60880 206 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 NFIAQ12857 509 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 IFI16Q16666 785 aaKnown RBP18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 KCTD19Q17RG1 926 aaPredicted RBP18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 TCERG1LQ5VWI1 586 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 METTL13Q8N6R0 699 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 ERMNQ8TAM6 284 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 NENFQ9UMX5 172 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 MYH4Q9Y623 1939 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 PDXKO00764 312 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 RPA1P27694 616 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 GJB7Q6PEY0 223 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 MOXD1Q6UVY6 613 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 COA1Q9GZY4 146 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 DNAJC18Q9H819 358 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 LRRC4BQ9NT99 713 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 SUGT1Q9Y2Z0 365 aa18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 NOC2LQ9Y3T9 749 aaKnown RBP18.68■□□□□ 0.58
SLC52A1-201ENST00000254853 ASTN1O14525 1302 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 FAM196BA6NMK8 535 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 FLOT1O75955 427 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 NR3C1P04150 777 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 EEF2P13639 858 aaKnown RBP18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 SLFN13Q68D06 897 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 C1orf131Q8NDD1 294 aaKnown RBP18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 FBXO41Q8TF61 875 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 KAT2BQ92831 832 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 LENG9Q96B70 501 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 EPN3Q9H201 632 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 HMGB1P1B2RPK0 211 aaPredicted RBP18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 PGRMC1O00264 195 aaKnown RBP18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 HSD17B3P37058 310 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 JAM2P57087 298 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 AP3B2Q13367 1082 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 SLC35C1Q96A29 364 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 DDX47Q9H0S4 455 aaKnown RBP18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 NEUROG2Q9H2A3 272 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 TMBIM4Q9HC24 238 aa18.67■□□□□ 0.58
SLC52A1-201ENST00000254853 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 LY75O60449 1722 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 FAM86B1E9PN63 330 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 CLIC2O15247 247 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 SART1O43290 800 aaKnown RBP18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 FAM86B2P0C5J1 330 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 CYP4A11Q02928 519 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 KCNA1Q09470 495 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 ITGB3BPQ13352 177 aaPredicted RBP18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 CUL1Q13616 776 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 UAP1Q16222 522 aaPredicted RBP18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 B4GALNT4Q76KP1 1039 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 EIF1ADQ8N9N8 165 aaKnown RBP18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 CRAMP1Q96RY5 1269 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 RUSC1Q9BVN2 902 aa18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 TYW1Q9NV66 732 aaKnown RBP18.66■□□□□ 0.58
SLC52A1-201ENST00000254853 BHMG1C9JSJ3 638 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms