RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 GON4LQ3T8J9 2241 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 NOVP48745 357 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 CCL14Q16627 93 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 ARHGAP44Q17R89 818 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 SPATA1Q5VX52 437 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 P2RX5Q93086 422 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 FAM20AQ96MK3 541 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 EYSQ5T1H1 3165 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 IGSF3O75054 1194 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 ELNP15502 786 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 ARSHQ5FYA8 562 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 RINT1Q6NUQ1 792 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 LBX2Q6XYB7 198 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 KCNMB3Q9NPA1 279 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 KBTBD4Q9NVX7 518 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 AGTPBP1Q9UPW5 1226 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 KRT9P35527 623 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 RBL2Q08999 1139 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 ZSWIM2Q8NEG5 633 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 AGO4Q9HCK5 861 aaKnown RBP12.85□□□□□ -0.35
LIN28A-201ENST00000254231 SOWAHBA6NEL2 793 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 INO80B-WBP1J3KQ70 363 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 ARIH2O95376 493 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 RPA1P27694 616 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 TCF7P36402 384 aaPredicted RBP12.85□□□□□ -0.35
LIN28A-201ENST00000254231 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
LIN28A-201ENST00000254231 FKBP15Q5T1M5 1219 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
LIN28A-201ENST00000254231 KCNF1Q9H3M0 494 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 SEMA6BQ9H3T3 888 aa12.85□□□□□ -0.35
LIN28A-201ENST00000254231 CTSHP09668 335 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 CETPP11597 493 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 PRPHP41219 470 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 PDIA5Q14554 519 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 VSIG10LQ86VR7 867 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
LIN28A-201ENST00000254231 ADD3Q9UEY8 706 aaKnown RBP12.84□□□□□ -0.35
LIN28A-201ENST00000254231 PUF60Q9UHX1 559 aaKnown RBP12.84□□□□□ -0.35
LIN28A-201ENST00000254231 PCDHA10Q9Y5I2 948 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 HNRNPDLO14979 420 aaKnown RBP12.84□□□□□ -0.35
LIN28A-201ENST00000254231 ACTN1P12814 892 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 PRKCEQ02156 737 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 PPARDQ03181 441 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 RHPN2Q8IUC4 686 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 IRX2Q9BZI1 471 aaPredicted RBP12.84□□□□□ -0.35
LIN28A-201ENST00000254231 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 KIAA1551Q9HCM1 1747 aa12.84□□□□□ -0.35
LIN28A-201ENST00000254231 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.83□□□□□ -0.35
LIN28A-201ENST00000254231 WDR64B1ANS9 1081 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 IGF2BP3O00425 579 aaKnown RBP eCLIP12.83□□□□□ -0.35
LIN28A-201ENST00000254231 PSMD10O75832 226 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 ALDH5A1P51649 535 aaPredicted RBP12.83□□□□□ -0.35
LIN28A-201ENST00000254231 CYP27A1Q02318 531 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 DRP2Q13474 957 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 TMEM130Q8N3G9 435 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 AFG1LQ8WV93 481 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 PARVGQ9HBI0 331 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 JADE2Q9NQC1 790 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 ZNF112Q9UJU3 913 aa12.83□□□□□ -0.35
LIN28A-201ENST00000254231 KNL1Q8NG31 2342 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 LRRN2O75325 713 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 RGS20O76081 388 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 CLCN3P51790 818 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 COPB1P53618 953 aaKnown RBP12.83□□□□□ -0.36
LIN28A-201ENST00000254231 RNASE9P60153 205 aaKnown RBP12.83□□□□□ -0.36
LIN28A-201ENST00000254231 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 CHORDC1Q9UHD1 332 aaPredicted RBP12.83□□□□□ -0.36
LIN28A-201ENST00000254231 CBFA2T2O43439 604 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 KLRC4O43908 158 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 PGK1P00558 417 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 P4HBP07237 508 aaKnown RBP12.83□□□□□ -0.36
LIN28A-201ENST00000254231 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
LIN28A-201ENST00000254231 TERF1P54274 439 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 GIT2Q14161 759 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 NOLC1Q14978 699 aaKnown RBP eCLIP12.83□□□□□ -0.36
LIN28A-201ENST00000254231 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 GJB7Q6PEY0 223 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 AKT3Q9Y243 479 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
LIN28A-201ENST00000254231 KDM3AQ9Y4C1 1321 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 NID2Q14112 1375 aa12.83□□□□□ -0.36
LIN28A-201ENST00000254231 A0A0U1RQJ8 604 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 ACOT2P49753 483 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
LIN28A-201ENST00000254231 UNC13DQ70J99 1090 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 RRAGAQ7L523 313 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 ADSSL1Q8N142 457 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 GTPBP4Q9BZE4 634 aaKnown RBP12.82□□□□□ -0.36
LIN28A-201ENST00000254231 VAV3Q9UKW4 847 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 CALCAP01258 141 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 CLCN1P35523 988 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 STAT5BP51692 787 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 CCNA1P78396 465 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 NFX1Q12986 1120 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms