RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ABHD15Q6UXT9 468 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 ZBTB10Q96DT7 871 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 CCDC136Q96JN2 1154 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 TRPV2Q9Y5S1 764 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 TTC3P53804 2025 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 FAM86B1E9PN63 330 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 DDX39AO00148 427 aaKnown RBP23.95■■□□□ 1.42
NEDD8-201ENST00000250495 BACH1O14867 736 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 HBP1O60381 514 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 FAM86B2P0C5J1 330 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 CD52P31358 61 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 TRAPPC12Q8WVT3 735 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 CELF4Q9BZC1 486 aaKnown RBP23.95■■□□□ 1.42
NEDD8-201ENST00000250495 AGO3Q9H9G7 860 aaKnown RBP23.95■■□□□ 1.42
NEDD8-201ENST00000250495 BDP1A6H8Y1 2624 aa23.95■■□□□ 1.42
NEDD8-201ENST00000250495 REC8O95072 547 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 CCNE2O96020 404 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 RPS6KB1P23443 525 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 TMEM62Q0P6H9 643 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 MIS18BP1Q6P0N0 1132 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 MTHFD1LQ6UB35 978 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 REXO1Q8N1G1 1221 aaKnown RBP23.94■■□□□ 1.42
NEDD8-201ENST00000250495 BANK1Q8NDB2 785 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 CRYGNQ8WXF5 182 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 TBC1D22BQ9NU19 505 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 XIRP2A4UGR9 3374 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 NLRC5Q86WI3 1866 aa23.94■■□□□ 1.42
NEDD8-201ENST00000250495 ADGRA3Q8IWK6 1321 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 C5orf67F2Z3F1 127 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 IPO5O00410 1097 aaKnown RBP23.93■■□□□ 1.42
NEDD8-201ENST00000250495 DHX15O43143 795 aaKnown RBP23.93■■□□□ 1.42
NEDD8-201ENST00000250495 KLRC1P26715 233 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 CTNNB1P35222 781 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 BMPR1AP36894 532 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 BTG3Q14201 252 aaPredicted RBP23.93■■□□□ 1.42
NEDD8-201ENST00000250495 PKN1Q16512 942 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 LEXMQ3ZCV2 418 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 FAM43BQ6ZT52 329 aaPredicted RBP23.93■■□□□ 1.42
NEDD8-201ENST00000250495 BICD2Q8TD16 824 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 ATP8B4Q8TF62 1192 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 ZNF689Q96CS4 500 aaPredicted RBP23.93■■□□□ 1.42
NEDD8-201ENST00000250495 ZNF577Q9BSK1 485 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 C1QTNF1Q9BXJ1 281 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 AGXT2Q9BYV1 514 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 ZNF302Q9NR11 478 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 PADI3Q9ULW8 664 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 RALGAPA2Q2PPJ7 1873 aa23.93■■□□□ 1.42
NEDD8-201ENST00000250495 NID2Q14112 1375 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 IGSF9BQ9UPX0 1349 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 KDM3AQ9Y4C1 1321 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 IGLV3-22A0A075B6J6 115 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 KCNA5P22460 613 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 SETQ01105 290 aaPredicted RBP23.92■■□□□ 1.42
NEDD8-201ENST00000250495 KRT76Q01546 638 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 ZNF484Q5JVG2 852 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 SWSAP1Q6NVH7 229 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 PDXDC2PQ6P474 469 aa23.92■■□□□ 1.42
NEDD8-201ENST00000250495 CLP1Q92989 425 aaKnown RBP23.92■■□□□ 1.42
NEDD8-201ENST00000250495 C11orf84Q9BUA3 381 aaPredicted RBP23.92■■□□□ 1.42
NEDD8-201ENST00000250495 RC3H2Q9HBD1 1191 aaKnown RBP23.92■■□□□ 1.42
NEDD8-201ENST00000250495 COL1A2P08123 1366 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 DGKIO75912 1065 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 COL9A1P20849 921 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 PAK2Q13177 524 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 RTN4RL1Q86UN2 441 aaPredicted RBP23.91■■□□□ 1.42
NEDD8-201ENST00000250495 CCDC60Q8IWA6 550 aaPredicted RBP23.91■■□□□ 1.42
NEDD8-201ENST00000250495 CCDC148Q8NFR7 591 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 PHKBQ93100 1093 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 RNF26Q9BY78 433 aaPredicted RBP23.91■■□□□ 1.42
NEDD8-201ENST00000250495 LMAN2LQ9H0V9 348 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 NSUN3Q9H649 340 aaKnown RBP23.91■■□□□ 1.42
NEDD8-201ENST00000250495 TCEAL9Q9UHQ7 104 aa23.91■■□□□ 1.42
NEDD8-201ENST00000250495 STAG3L1P0CL83 205 aa23.9■■□□□ 1.42
NEDD8-201ENST00000250495 NTRK3Q16288 839 aa23.9■■□□□ 1.42
NEDD8-201ENST00000250495 PUS10Q3MIT2 529 aaKnown RBP23.9■■□□□ 1.42
NEDD8-201ENST00000250495 ZNF746Q6NUN9 644 aaPredicted RBP23.9■■□□□ 1.42
NEDD8-201ENST00000250495 SMAP1Q8IYB5 467 aaPredicted RBP23.9■■□□□ 1.42
NEDD8-201ENST00000250495 LOXHD1Q8IVV2 1947 aa23.9■■□□□ 1.42
NEDD8-201ENST00000250495 NCK2O43639 380 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 IFNAR1P17181 557 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 EVCP57679 992 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 TCEAL5Q5H9L2 206 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 ODR4Q5SWX8 454 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 NPAS4Q8IUM7 802 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 CKAP2LQ8IYA6 745 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.89■■□□□ 1.41
NEDD8-201ENST00000250495 LINC01599Q8WXQ3 324 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 PLVAPQ9BX97 442 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 SLC26A6Q9BXS9 759 aa23.89■■□□□ 1.41
NEDD8-201ENST00000250495 ADAMTS3O15072 1205 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 EPB41L2O43491 1005 aaKnown RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 PSAPP07602 524 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 LINC00271P0C7V0 271 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 PDIA3P30101 505 aaKnown RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 CIITAP33076 1130 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 NFX1Q12986 1120 aaKnown RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 PRR16Q569H4 304 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 CMTR2Q8IYT2 770 aaKnown RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 KIAA0319LQ8IZA0 1049 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 CRIPAKQ8N1N5 446 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms