RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 EIF3DO15371 548 aaKnown RBP eCLIP27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 NR3C1P04150 777 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 EPS15P42566 896 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 POLR2FP61218 127 aaKnown RBP27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 BMS1Q14692 1282 aaKnown RBP27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 GPIHBP1Q8IV16 184 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 MICALL2Q8IY33 904 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 IL31RAQ8NI17 732 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 CTAGE15A4D2H0 777 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 USO1O60763 962 aaKnown RBP27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 CTAGE8P0CG41 777 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 GMPSP49915 693 aaPredicted RBP27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 SFMBT2Q5VUG0 894 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 SAMD7Q7Z3H4 446 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 CTAGE6Q86UF2 777 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 CTAGE4Q8IX94 777 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 CPXCR1Q8N123 301 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 MYCT1Q8N699 235 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 SECISBP2LQ93073 1101 aaKnown RBP27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 GANQ9H2C0 597 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 HDAC6Q9UBN7 1215 aa27.71■■■□□ 2.03
TMEM55B-201ENST00000250489 MACROD2A1Z1Q3 448 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 SLC16A3O15427 465 aaKnown RBP27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 TLR2O60603 784 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 AKAP3O75969 853 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 ALAS1P13196 640 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 RPL13P26373 211 aaKnown RBP27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 KCNA1Q09470 495 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 NIPA1Q7RTP0 329 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 LXNQ9BS40 222 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 PARVGQ9HBI0 331 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 RAVER2Q9HCJ3 691 aaKnown RBP27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 KCND2Q9NZV8 630 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 FHOD1Q9Y613 1164 aa27.7■■■□□ 2.03
TMEM55B-201ENST00000250489 NMT1P30419 496 aaKnown RBP27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 ZNF131P52739 623 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 APBA1Q02410 837 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 NEK9Q8TD19 979 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 ANKZF1Q9H8Y5 726 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 HACL1Q9UJ83 578 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 ZMYM2Q9UBW7 1377 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 ANO9A1A5B4 782 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 AFPP02771 609 aaKnown RBP27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 SLC9C1Q4G0N8 1177 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 KRT222Q8N1A0 295 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 KCNH7Q9NS40 1196 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 SEL1LQ9UBV2 794 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 SAR1BQ9Y6B6 198 aa27.69■■■□□ 2.02
TMEM55B-201ENST00000250489 TGFB1I1O43294 461 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 SERPING1P05155 500 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 VCAM1P19320 739 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 TBC1D10BQ4KMP7 808 aaPredicted RBP27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 MUM1L1Q5H9M0 696 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 CC2D1AQ6P1N0 951 aaPredicted RBP27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 MSANTD4Q8NCY6 345 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 BANK1Q8NDB2 785 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 SYTL5Q8TDW5 730 aaPredicted RBP27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 FIZ1Q96SL8 496 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 MTFR1LQ9H019 292 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 METTL14Q9HCE5 456 aaKnown RBP27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 ODF2LQ9ULJ1 636 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 PPP1R9AQ9ULJ8 1098 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 UBIAD1Q9Y5Z9 338 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 DDX39AO00148 427 aaKnown RBP27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 FLOT1O75955 427 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 SEC31AO94979 1220 aaKnown RBP27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 MTMR2Q13614 643 aa27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 PPP1R1BQ9UD71 204 aaPredicted RBP27.68■■■□□ 2.02
TMEM55B-201ENST00000250489 POTEB2H3BUK9 544 aa27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 PJA2O43164 708 aa27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 PNMA6AP0CW24 399 aaPredicted RBP27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 EPB41P11171 864 aaKnown RBP27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 XRCC5P13010 732 aaKnown RBP27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 MAGEA1P43355 309 aa27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 TDRD12Q587J7 1177 aaKnown RBP27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 PCNX4Q63HM2 1172 aa27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 DPY19L2P1Q6NXN4 242 aa27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 MAP3K20Q9NYL2 800 aaKnown RBP27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 PKD2L1Q9P0L9 805 aa27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 CNOT7Q9UIV1 285 aaKnown RBP27.67■■■□□ 2.02
TMEM55B-201ENST00000250489 RBAK-RBAKDNI3L0D1 243 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 CLIC2O15247 247 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 DHX15O43143 795 aaKnown RBP27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 CASP4P49662 377 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 GFPT1Q06210 699 aaPredicted RBP27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 NFIL3Q16649 462 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 TKFCQ3LXA3 575 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 ZC2HC1CQ53FD0 456 aaPredicted RBP27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 NBPF12Q5TAG4 269 aaPredicted RBP27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 MIER3Q7Z3K6 550 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 PLCB1Q9NQ66 1216 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 HOMER2Q9NSB8 354 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 BCS1LQ9Y276 419 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 UBE4BO95155 1302 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 LTBP3Q9NS15 1303 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 LOXHD1Q8IVV2 1947 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 GUCY2CP25092 1073 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 MRPS9P82933 396 aaKnown RBP27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 SAMD3Q8N6K7 520 aa27.66■■■□□ 2.02
TMEM55B-201ENST00000250489 TRIM58Q8NG06 486 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms