RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.37
LRFN1-201ENST00000248668 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.37
LRFN1-201ENST00000248668 RASA3Q14644 834 aa17.33■□□□□ 0.37
LRFN1-201ENST00000248668 COG2Q14746 738 aa17.33■□□□□ 0.37
LRFN1-201ENST00000248668 CEP55Q53EZ4 464 aa17.33■□□□□ 0.37
LRFN1-201ENST00000248668 ARMCX3Q9UH62 379 aaPredicted RBP17.33■□□□□ 0.37
LRFN1-201ENST00000248668 FZD1Q9UP38 647 aa17.33■□□□□ 0.37
LRFN1-201ENST00000248668 ZNF646O15015 1829 aaPredicted RBP17.33■□□□□ 0.37
LRFN1-201ENST00000248668 GYS2P54840 703 aa17.33■□□□□ 0.36
LRFN1-201ENST00000248668 C2orf54Q08AI8 447 aa17.33■□□□□ 0.36
LRFN1-201ENST00000248668 PTPROQ16827 1216 aa17.33■□□□□ 0.36
LRFN1-201ENST00000248668 HGSNATQ68CP4 663 aa17.33■□□□□ 0.36
LRFN1-201ENST00000248668 EHBP1Q8NDI1 1231 aa17.33■□□□□ 0.36
LRFN1-201ENST00000248668 FUT8Q9BYC5 575 aa17.33■□□□□ 0.36
LRFN1-201ENST00000248668 SH2D4AQ9H788 454 aa17.33■□□□□ 0.36
LRFN1-201ENST00000248668 PIK3CDO00329 1044 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 EYA4O95677 639 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 HNRNPH3P31942 346 aaKnown RBP17.32■□□□□ 0.36
LRFN1-201ENST00000248668 NFRKBQ6P4R8 1299 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 IL31RAQ8NI17 732 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 COG1Q8WTW3 980 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
LRFN1-201ENST00000248668 UNC45AQ9H3U1 944 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 ADAMTS1Q9UHI8 967 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 BCS1LQ9Y276 419 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 MRPL11Q9Y3B7 192 aaKnown RBP17.32■□□□□ 0.36
LRFN1-201ENST00000248668 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 ALAS1P13196 640 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 CDK17Q00537 523 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 SLC20A2Q08357 652 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 GJB7Q6PEY0 223 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 GSPT2Q8IYD1 628 aaKnown RBP17.32■□□□□ 0.36
LRFN1-201ENST00000248668 HOOK2Q96ED9 719 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 PSMD1Q99460 953 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 HSD17B14Q9BPX1 270 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 CEP72Q9P209 647 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 TACC1O75410 805 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 PSMD10O75832 226 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 NR3C1P04150 777 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 CYP3A4P08684 503 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 SLC9C1Q4G0N8 1177 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 COL20A1Q9P218 1284 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 RSPH14Q9UHP6 348 aa17.32■□□□□ 0.36
LRFN1-201ENST00000248668 TUBB2AQ13885 445 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 MCTP2Q6DN12 878 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 GPATCH11Q8N954 259 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 TUBB2BQ9BVA1 445 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 PACSIN1Q9BY11 444 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 RAVER2Q9HCJ3 691 aaKnown RBP17.31■□□□□ 0.36
LRFN1-201ENST00000248668 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 ASTN1O14525 1302 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 GNA14O95837 355 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 PRAMEF18Q5VWM3 479 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 PAPD7Q5XG87 772 aaKnown RBP17.31■□□□□ 0.36
LRFN1-201ENST00000248668 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 PURBQ96QR8 312 aaKnown RBP17.31■□□□□ 0.36
LRFN1-201ENST00000248668 POLR3CQ9BUI4 534 aaPredicted RBP17.31■□□□□ 0.36
LRFN1-201ENST00000248668 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 OAS2P29728 719 aaKnown RBP17.31■□□□□ 0.36
LRFN1-201ENST00000248668 CYP2C19P33261 490 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 KLHL30Q0D2K2 578 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 SMC1AQ14683 1233 aaKnown RBP17.31■□□□□ 0.36
LRFN1-201ENST00000248668 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
LRFN1-201ENST00000248668 PLEKHA4Q9H4M7 779 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 SAMM50Q9Y512 469 aa17.31■□□□□ 0.36
LRFN1-201ENST00000248668 IPO5O00410 1097 aaKnown RBP17.3■□□□□ 0.36
LRFN1-201ENST00000248668 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
LRFN1-201ENST00000248668 CYP2J2P51589 502 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 PRELPP51888 382 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 EDRF1Q3B7T1 1238 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 MSANTD4Q8NCY6 345 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 SPAG5Q96R06 1193 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 LXNQ9BS40 222 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 WDR11Q9BZH6 1224 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 TSGA10Q9BZW7 698 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 BRD3Q15059 726 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 BEND6Q5SZJ8 279 aaPredicted RBP17.3■□□□□ 0.36
LRFN1-201ENST00000248668 SAMD7Q7Z3H4 446 aa17.3■□□□□ 0.36
LRFN1-201ENST00000248668 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
LRFN1-201ENST00000248668 A0A087X0T9 212 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 TMEM150BA6NC51 233 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 TRIM66O15016 1216 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 CALUO43852 315 aaPredicted RBP17.29■□□□□ 0.36
LRFN1-201ENST00000248668 ASNSP08243 561 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 FAM228BP0C875 321 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 ITGB5P18084 799 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 EPM2AIP1Q7L775 607 aaPredicted RBP17.29■□□□□ 0.36
LRFN1-201ENST00000248668 TRIM58Q8NG06 486 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 IQCDQ96DY2 449 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 PACSIN2Q9UNF0 486 aaPredicted RBP17.29■□□□□ 0.36
LRFN1-201ENST00000248668 RNASE9P60153 205 aaKnown RBP17.29■□□□□ 0.36
LRFN1-201ENST00000248668 EP400NLQ6ZTU2 488 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 C10orf67Q8IYJ2 551 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 AFPP02771 609 aaKnown RBP17.29■□□□□ 0.36
LRFN1-201ENST00000248668 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
LRFN1-201ENST00000248668 ASIC2Q16515 512 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 EXOC3L4Q17RC7 722 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 ASTE1Q2TB18 679 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms