RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CYP3A4P08684 503 aa23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 KIAA0753Q2KHM9 967 aa23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 EMBQ6PCB8 327 aa23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 MS4A14Q96JA4 679 aa23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 HINFPQ9BQA5 517 aa23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 TYW1Q9NV66 732 aaKnown RBP23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 SERPINA10Q9UK55 444 aa23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 EP400Q96L91 3159 aa23.74■■□□□ 1.39
SH2D3A-201ENST00000245908 GRID2IPA4D2P6 1211 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 BMP3P12645 472 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 IKQ13123 557 aaPredicted RBP23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 C10orf76Q5T2E6 689 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 IRF2BP2Q7Z5L9 587 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 ATRNL1Q5VV63 1379 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 ACTN1P12814 892 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 SLC9A1P19634 815 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 KRT27Q7Z3Y8 459 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 KCTD17Q8N5Z5 321 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 PACSIN1Q9BY11 444 aa23.73■■□□□ 1.39
SH2D3A-201ENST00000245908 ASTN1O14525 1302 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 SLC16A3O15427 465 aaKnown RBP23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 ECE2O60344 883 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 EYA4O95677 639 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 FTCDO95954 541 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 UCHL3P15374 230 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 MRPS25P82663 173 aaKnown RBP23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 SLX4Q8IY92 1834 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 CAVIN3Q969G5 261 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 BZW2Q9Y6E2 419 aaKnown RBP23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 PIK3CDO00329 1044 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 XRCC5P13010 732 aaKnown RBP23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 PON1P27169 355 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 EXOC3L4Q17RC7 722 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 EIF2AK1Q9BQI3 630 aaKnown RBP23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 RUSC1Q9BVN2 902 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 BHMT2Q9H2M3 363 aa23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 METTL14Q9HCE5 456 aaKnown RBP23.72■■□□□ 1.39
SH2D3A-201ENST00000245908 RSPH10B2B2RC85 870 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 RSPH10BP0C881 870 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 JAG1P78504 1218 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 PTK2Q05397 1052 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 EPHA7Q15375 998 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 ZNF622Q969S3 477 aaKnown RBP eCLIP23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 RABGAP1Q9Y3P9 1069 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 AKAP3O75969 853 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 NR3C1P04150 777 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 MMP10P09238 476 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 TAL1P17542 331 aaPredicted RBP23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 RPL13P26373 211 aaKnown RBP23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 CYP4A11Q02928 519 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 NNTQ13423 1086 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 ENOX2Q16206 610 aaKnown RBP23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 ZNF571Q7Z3V5 609 aaPredicted RBP23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 AKT1S1Q96B36 256 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 INPP4AQ96PE3 977 aaPredicted RBP23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 SPAG5Q96R06 1193 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 FBXL5Q9UKA1 691 aa23.71■■□□□ 1.39
SH2D3A-201ENST00000245908 COL2A1P02458 1487 aaPredicted RBP23.7■■□□□ 1.39
SH2D3A-201ENST00000245908 TBCAO75347 108 aaKnown RBP23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 ENTPD3O75355 529 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 GH2P01242 217 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 HOXA13P31271 388 aaPredicted RBP23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 PRKCIP41743 596 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 RBM26Q5T8P6 1007 aaKnown RBP23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 LRRC31Q6UY01 552 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 CYP2W1Q8TAV3 490 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 SH3GL2Q99962 352 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 QTRT2Q9H974 415 aaKnown RBP23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 GDF3Q9NR23 364 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 OLFML3Q9NRN5 406 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 SYNPO2Q9UMS6 1093 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 IGLV3-22A0A075B6J6 115 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 EML1O00423 815 aa23.7■■□□□ 1.38
SH2D3A-201ENST00000245908 ATP8B3O60423 1300 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 CES2O00748 559 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 EPB41P11171 864 aaKnown RBP23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 GAP43P17677 238 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 ANXA13P27216 316 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 ZNF76P36508 570 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 TEX2Q8IWB9 1127 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 IFT20Q8IY31 132 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 PRR12Q9ULL5 1215 aa23.69■■□□□ 1.38
SH2D3A-201ENST00000245908 GCNT3O95395 438 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 DCAF17Q5H9S7 520 aaPredicted RBP23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 ALS2CLQ60I27 953 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 GBP6Q6ZN66 633 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 FAM76AQ8TAV0 307 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 SLC35C1Q96A29 364 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 SIX2Q9NPC8 291 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 A0A1W2PRG0 241 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 RRP1BQ14684 758 aaKnown RBP23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 RINT1Q6NUQ1 792 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 TSEN2Q8NCE0 465 aaKnown RBP23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 RBM46Q8TBY0 533 aaKnown RBP23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 TDRD3Q9H7E2 651 aaKnown RBP23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 RGL1Q9NZL6 768 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 NENFQ9UMX5 172 aa23.68■■□□□ 1.38
SH2D3A-201ENST00000245908 GTPBP10A4D1E9 387 aaKnown RBP23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 GOLGA6CA6NDK9 693 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 GOLGA8KD6RF30 607 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms