RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 FAM228AQ86W67 206 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 PARP9Q8IXQ6 854 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 UIMC1Q96RL1 719 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 TACO1Q9BSH4 297 aaKnown RBP16.93■□□□□ 0.3
DDX55-201ENST00000238146 HAUS2Q9NVX0 235 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 SUCLA2Q9P2R7 463 aaPredicted RBP16.93■□□□□ 0.3
DDX55-201ENST00000238146 FLOT1O75955 427 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 BTDP43251 543 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 SCTRP47872 440 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 NEDD9Q14511 834 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 DDB1Q16531 1140 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 LACTB2Q53H82 288 aaPredicted RBP16.92■□□□□ 0.3
DDX55-201ENST00000238146 PPP4R3CPQ6ZMV5 832 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 CCDC26Q8TAB7 109 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 SGSM3Q96HU1 749 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 DPH5Q9H2P9 285 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 MCM8Q9UJA3 840 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 CASP5P51878 434 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 POU5F1Q01860 360 aaKnown RBP16.92■□□□□ 0.3
DDX55-201ENST00000238146 SNCBQ16143 134 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 EXOC3L4Q17RC7 722 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 GKAP1Q5VSY0 366 aaPredicted RBP16.92■□□□□ 0.3
DDX55-201ENST00000238146 NT5DC3Q86UY8 548 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 MARCH10Q8NA82 808 aaPredicted RBP16.92■□□□□ 0.3
DDX55-201ENST00000238146 KDM3AQ9Y4C1 1321 aa16.92■□□□□ 0.3
DDX55-201ENST00000238146 DDX60LQ5H9U9 1706 aaKnown RBP16.91■□□□□ 0.3
DDX55-201ENST00000238146 POTEB3A0JP26 581 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 POTECB2RU33 542 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 AFPP02771 609 aaKnown RBP16.91■□□□□ 0.3
DDX55-201ENST00000238146 DRD4P21917 467 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 TM4SF1P30408 202 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 CLK2P49760 499 aaKnown RBP16.91■□□□□ 0.3
DDX55-201ENST00000238146 POTEBQ6S5H4 581 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 LMBR1Q8WVP7 490 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 PSMD1Q99460 953 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 ARMCX3Q9UH62 379 aaPredicted RBP16.91■□□□□ 0.3
DDX55-201ENST00000238146 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
DDX55-201ENST00000238146 C21orf2O43822 256 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 H2AFZP0C0S5 128 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 ARSHQ5FYA8 562 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 H2AFVQ71UI9 128 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 FRMD5Q7Z6J6 570 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 CPLX4Q7Z7G2 160 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 DAAM2Q86T65 1068 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 LINC00116Q8NCU8 138 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 MDM1Q8TC05 714 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 CCT6BQ92526 530 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 TLCD1Q96CP7 247 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 HES6Q96HZ4 224 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 FAM114A2Q9NRY5 505 aa16.91■□□□□ 0.3
DDX55-201ENST00000238146 AJAP1Q9UKB5 411 aaPredicted RBP16.91■□□□□ 0.3
DDX55-201ENST00000238146 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 A0A0A6YYK5 440 aaPredicted RBP16.9■□□□□ 0.3
DDX55-201ENST00000238146 FRMD3A2A2Y4 597 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 PPP1R11O60927 126 aaPredicted RBP16.9■□□□□ 0.3
DDX55-201ENST00000238146 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
DDX55-201ENST00000238146 LRRC47Q8N1G4 583 aaKnown RBP16.9■□□□□ 0.3
DDX55-201ENST00000238146 GIMAP7Q8NHV1 300 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 NYXQ9GZU5 481 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 GPCPD1Q9NPB8 672 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 TPX2Q9ULW0 747 aaKnown RBP16.9■□□□□ 0.3
DDX55-201ENST00000238146 UTP11Q9Y3A2 253 aaKnown RBP16.9■□□□□ 0.3
DDX55-201ENST00000238146 NR2E1Q9Y466 385 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 DDX3XO00571 662 aaKnown RBP eCLIP16.9■□□□□ 0.34e-17■■■□□ 15.8
DDX55-201ENST00000238146 ATP2C2O75185 946 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 XRCC4Q13426 336 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 TRIM51Q9BSJ1 452 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 TXLNGYQ9BZA5 131 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 JMJD4Q9H9V9 463 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 ANKIB1Q9P2G1 1089 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 TRAF3IP3Q9Y228 551 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 ATP8A1Q9Y2Q0 1164 aa16.9■□□□□ 0.3
DDX55-201ENST00000238146 PPFIA2O75334 1257 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 KCNQ4P56696 695 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 EPHA7Q15375 998 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 ERMARDQ5T6L9 678 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 SYCE1Q8N0S2 351 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 ATP8B4Q8TF62 1192 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 TRIM31Q9BZY9 425 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 ATP8B3O60423 1300 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 PNMA6FA0A0J9YX94 578 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
DDX55-201ENST00000238146 ANXA13P27216 316 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 HOXD13P35453 343 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 IFFO1Q0D2I5 559 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 CEP57Q86XR8 500 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 CCDC50Q8IVM0 306 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 P3H4Q92791 437 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 CHMP6Q96FZ7 201 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 XPO6Q96QU8 1125 aaKnown RBP16.89■□□□□ 0.29
DDX55-201ENST00000238146 CNOT10Q9H9A5 744 aaKnown RBP16.89■□□□□ 0.29
DDX55-201ENST00000238146 SIX2Q9NPC8 291 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 MTMR4Q9NYA4 1195 aa16.89■□□□□ 0.29
DDX55-201ENST00000238146 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms