RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SEMA3FQ13275 785 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 DGKZQ13574 1117 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 SLC18A3Q16572 532 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 EXOC3L4Q17RC7 722 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 PPP1R18Q6NYC8 613 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 NLGN1Q8N2Q7 840 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 GOLGA6L1Q8N7Z2 621 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 WDR18Q9BV38 432 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 GLIS2Q9BZE0 524 aaPredicted RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 GANQ9H2C0 597 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 GRID2IPA4D2P6 1211 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 TISP43B9A030 160 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
SYDE2-201ENST00000234668 LCA5LO95447 670 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 TRIM49P0CI25 452 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 TRIM49CP0CI26 452 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 TCP1P17987 556 aaKnown RBP10.03□□□□□ -0.8
SYDE2-201ENST00000234668 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 TUBB4BP68371 445 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 NAA35Q5VZE5 725 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 CCDC70Q6NSX1 233 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 IRF2BP2Q7Z5L9 587 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 NYAP2Q9P242 653 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 WRAP73Q9P2S5 460 aaPredicted RBP10.03□□□□□ -0.8
SYDE2-201ENST00000234668 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 NR3C1P04150 777 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 XRCC5P13010 732 aaKnown RBP10.03□□□□□ -0.8
SYDE2-201ENST00000234668 ABCB4P21439 1286 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 RPA1P27694 616 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 HYIQ5T013 277 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 MMGT1Q8N4V1 131 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 SYT2Q8N9I0 419 aaPredicted RBP10.03□□□□□ -0.8
SYDE2-201ENST00000234668 BANK1Q8NDB2 785 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 AENQ8WTP8 325 aaKnown RBP10.03□□□□□ -0.8
SYDE2-201ENST00000234668 CEP63Q96MT8 703 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 CENPHQ9H3R5 247 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 SEPT11Q9NVA2 429 aaKnown RBP10.03□□□□□ -0.8
SYDE2-201ENST00000234668 STIM2Q9P246 746 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 FAM184BQ9ULE4 1060 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 RABGAP1Q9Y3P9 1069 aa10.03□□□□□ -0.8
SYDE2-201ENST00000234668 SSU72P8A0A1W2PR75 194 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 TARSL2A2RTX5 802 aaKnown RBP10.02□□□□□ -0.8
SYDE2-201ENST00000234668 C21orf2O43822 256 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 CEP104O60308 925 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 TBCAO75347 108 aaKnown RBP10.02□□□□□ -0.8
SYDE2-201ENST00000234668 ARP10275 920 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 LLGL1Q15334 1064 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 NAB2Q15742 525 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 ARHGAP44Q17R89 818 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 CFAP221Q4G0U5 840 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 RINT1Q6NUQ1 792 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 U2AF1L4Q8WU68 220 aaKnown RBP10.02□□□□□ -0.8
SYDE2-201ENST00000234668 DCAF4Q8WV16 495 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 MKL1Q969V6 931 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 RPGRIP1Q96KN7 1286 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 ACBD3Q9H3P7 528 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 PCIF1Q9H4Z3 704 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.02□□□□□ -0.8
SYDE2-201ENST00000234668 SUGT1Q9Y2Z0 365 aa10.02□□□□□ -0.8
SYDE2-201ENST00000234668 TMEM150BA6NC51 233 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 GOLGA6CA6NDK9 693 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 PJA2O43164 708 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 SLITRK3O94933 977 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 AFPP02771 609 aaKnown RBP10.02□□□□□ -0.81
SYDE2-201ENST00000234668 GOLGA6DP0CG33 693 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 COPB2P35606 906 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 ALKBH5Q6P6C2 394 aaKnown RBP10.02□□□□□ -0.81
SYDE2-201ENST00000234668 TMEM179Q6ZVK1 233 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 ERMNQ8TAM6 284 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 GOLGA5Q8TBA6 731 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 GOLGA6AQ9NYA3 693 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 GCNT4Q9P109 453 aa10.02□□□□□ -0.81
SYDE2-201ENST00000234668 CYP3A7-CYP3A51PA0A087WV96 503 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 TGFB1I1O43294 461 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
SYDE2-201ENST00000234668 FAM13AO94988 1023 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 CYP3A7P24462 503 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 PDE6BP35913 854 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 IQCEQ6IPM2 695 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 CRYGNQ8WXF5 182 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 CCDC43Q96MW1 224 aaKnown RBP10.01□□□□□ -0.81
SYDE2-201ENST00000234668 PDGFDQ9GZP0 370 aaPredicted RBP10.01□□□□□ -0.81
SYDE2-201ENST00000234668 MED4Q9NPJ6 270 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 VAV3Q9UKW4 847 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 ASTN1O14525 1302 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 YDJCA8MPS7 323 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 RAD51CO43502 376 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 TUBBP07437 444 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 ITGA4P13612 1032 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 HLTFQ14527 1009 aaKnown RBP eCLIP10.01□□□□□ -0.81
SYDE2-201ENST00000234668 STRIP1Q5VSL9 837 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 LRCH2Q5VUJ6 765 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 TATDN1Q6P1N9 297 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms