RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 AKR1B15C9JRZ8 316 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-201ENST00000229265 MEIS1O00470 390 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 OPLAHO14841 1288 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 ATP2A1O14983 1001 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 GNA14O95837 355 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 HOXC6P09630 235 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 SYN1P17600 705 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
CDCA3-201ENST00000229265 FXR1P51114 621 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDCA3-201ENST00000229265 UBXN2AP68543 259 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 TKFCQ3LXA3 575 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 SYT2Q8N9I0 419 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-201ENST00000229265 STAMQ92783 540 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 P2RX5Q93086 422 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 RAVER2Q9HCJ3 691 aaKnown RBP11.85□□□□□ -0.51
CDCA3-201ENST00000229265 ZMYND8Q9ULU4 1186 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-201ENST00000229265 PYCARDQ9ULZ3 195 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 LTBP2Q14767 1821 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 MYADML2A6NDP7 307 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 FECHP22830 423 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 RGS2P41220 211 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 ASIC1P78348 528 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 SPIRE1Q08AE8 756 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 PPP2R5CQ13362 524 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 PTPN14Q15678 1187 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 ZNF792Q3KQV3 632 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 CEP55Q53EZ4 464 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 FIGNQ5HY92 759 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 TTI2Q6NXR4 508 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 ARMCX5Q6P1M9 558 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 NCAPG2Q86XI2 1143 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 DDX12PQ92771 950 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 KIFC2Q96AC6 838 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 AGBL1Q96MI9 1066 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 HOXC10Q9NYD6 342 aa11.84□□□□□ -0.51
CDCA3-201ENST00000229265 DNAJC25-GNG10A0A024R161 153 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 MYMKA6NI61 221 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 KCNJ18B7U540 433 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 N4BP3O15049 544 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 PSMD10O75832 226 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 SNAI1O95863 264 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-201ENST00000229265 GTF2F1P35269 517 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDCA3-201ENST00000229265 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
CDCA3-201ENST00000229265 CNTN2Q02246 1040 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 LRMPQ12912 555 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 KCNJ12Q14500 433 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 MCM6Q14566 821 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 EPHA7Q15375 998 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 PRR16Q569H4 304 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 KLHL10Q6JEL2 608 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 CCAR2Q8N163 923 aaKnown RBP11.83□□□□□ -0.52
CDCA3-201ENST00000229265 SOCS4Q8WXH5 440 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 SLC5A5Q92911 643 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 LENG9Q96B70 501 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 DNAJC19Q96DA6 116 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 MAML3Q96JK9 1138 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 TSG101Q99816 390 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 HSD17B14Q9BPX1 270 aa11.83□□□□□ -0.52
CDCA3-201ENST00000229265 SRRTQ9BXP5 876 aaKnown RBP11.83□□□□□ -0.52
CDCA3-201ENST00000229265 HMX1Q9NP08 348 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-201ENST00000229265 MSH4O15457 936 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 STAM2O75886 525 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 EYA4O95677 639 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 CFBP00751 764 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 PLA2G4BP0C869 781 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 ZNF865P0CJ78 1059 aaPredicted RBP11.82□□□□□ -0.52
CDCA3-201ENST00000229265 CASP1P29466 404 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
CDCA3-201ENST00000229265 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
CDCA3-201ENST00000229265 PPP2R3AQ06190 1150 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 STK4Q13043 487 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 KRT31Q15323 416 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 USH1GQ495M9 461 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 GJC2Q5T442 439 aaPredicted RBP11.82□□□□□ -0.52
CDCA3-201ENST00000229265 NYAP1Q6ZVC0 841 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 CATSPER3Q86XQ3 398 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 IRF2BP1Q8IU81 584 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 TMTC1Q8IUR5 882 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 C7orf61Q8IZ16 206 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 MYOCDQ8IZQ8 938 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 CSGALNACT2Q8N6G5 542 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 TC2NQ8N9U0 490 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 SHCBP1Q8NEM2 672 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 ZNF507Q8TCN5 953 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 DPF3Q92784 378 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 NACC1Q96RE7 527 aa11.82□□□□□ -0.52
CDCA3-201ENST00000229265 BAG1Q99933 345 aaPredicted RBP11.82□□□□□ -0.52
CDCA3-201ENST00000229265 MXRA8Q9BRK3 442 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms