RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 OGFRQ9NZT2 677 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 PASKQ96RG2 1323 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 CLTCQ00610 1675 aaKnown RBP19.95■□□□□ 0.78
CLIP2-201ENST00000223398 MB21D2Q8IYB1 491 aaPredicted RBP19.95■□□□□ 0.78
CLIP2-201ENST00000223398 CACYBPQ9HB71 228 aaKnown RBP19.95■□□□□ 0.78
CLIP2-201ENST00000223398 UBN1Q9NPG3 1134 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 ABCF3Q9NUQ8 709 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 SPTLC3Q9NUV7 552 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 GUCY2DQ02846 1103 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 ANKRD20A3Q5VUR7 823 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 RPGRIP1Q96KN7 1286 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 TOPORSQ9NS56 1045 aaPredicted RBP19.95■□□□□ 0.78
CLIP2-201ENST00000223398 LRRD1A4D1F6 860 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 GMPSP49915 693 aaPredicted RBP19.95■□□□□ 0.78
CLIP2-201ENST00000223398 RWDD4Q6NW29 188 aaKnown RBP19.95■□□□□ 0.78
CLIP2-201ENST00000223398 IFT122Q9HBG6 1241 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 ALCAMQ13740 583 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 SPHKAPQ2M3C7 1700 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 SPATA31A5Q5VU36 1347 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 SPATA31A7Q8IWB4 1347 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 SLC35F6Q8N357 371 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 NDST4Q9H3R1 872 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 CEP152O94986 1710 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 CXCR5P32302 372 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 SKIV2LQ15477 1246 aaKnown RBP19.94■□□□□ 0.78
CLIP2-201ENST00000223398 DARS2Q6PI48 645 aaKnown RBP19.94■□□□□ 0.78
CLIP2-201ENST00000223398 RAPH1Q70E73 1250 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 THEM5Q8N1Q8 247 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 TSC1Q92574 1164 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 IPO5O00410 1097 aaKnown RBP19.94■□□□□ 0.78
CLIP2-201ENST00000223398 TDP2O95551 362 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 EIF4A3P38919 411 aaKnown RBP19.94■□□□□ 0.78
CLIP2-201ENST00000223398 ZNF34Q8IZ26 560 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 GDAP1Q8TB36 358 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 OSBPL5Q9H0X9 879 aaPredicted RBP19.94■□□□□ 0.78
CLIP2-201ENST00000223398 PDE1BQ01064 536 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 SAMD7Q7Z3H4 446 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 GPATCH11Q8N954 259 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 ZWILCHQ9H900 591 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 ZNF70Q9UC06 446 aaPredicted RBP19.94■□□□□ 0.78
CLIP2-201ENST00000223398 SRGAP2BP0DMP2 458 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 PPFIBP2Q8ND30 876 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 MRPL47Q9HD33 250 aaKnown RBP19.94■□□□□ 0.78
CLIP2-201ENST00000223398 LMCD1Q9NZU5 365 aa19.94■□□□□ 0.78
CLIP2-201ENST00000223398 LDHAP00338 332 aaKnown RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 GCLMP48507 274 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 EPHB1P54762 984 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 PPP2R5EQ16537 467 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 SGO2Q562F6 1265 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 ACRBPQ8NEB7 543 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 FAM81BQ96LP2 452 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 TYW1Q9NV66 732 aaKnown RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 MCF2LO15068 1137 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 MOCS3O95396 460 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 THAP9Q9H5L6 903 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 QARSP47897 775 aaKnown RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 HSPH1Q92598 858 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 CDKL2Q92772 493 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 POLR3FQ9H1D9 316 aaPredicted RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 NGRNQ9NPE2 291 aaKnown RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 BASP1P80723 227 aaKnown RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 TRIM28Q13263 835 aaKnown RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 SEPT6Q14141 434 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 TRIP13Q15645 432 aaPredicted RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 ERICH1Q86X53 443 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 PASD1Q8IV76 773 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 NEDD1Q8NHV4 660 aa19.93■□□□□ 0.78
CLIP2-201ENST00000223398 GPBP1L1Q9HC44 474 aaPredicted RBP19.93■□□□□ 0.78
CLIP2-201ENST00000223398 PP2D1A8MPX8 630 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 TXNP10599 105 aaKnown RBP19.92■□□□□ 0.78
CLIP2-201ENST00000223398 PPFIA1Q13136 1202 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 RSBN1LQ6PCB5 846 aaPredicted RBP19.92■□□□□ 0.78
CLIP2-201ENST00000223398 ADCY1Q08828 1119 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 C12orf60Q5U649 245 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 ELMSAN1Q6PJG2 1045 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 ARHGEF18Q6ZSZ5 1173 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 LXNQ9BS40 222 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 CDC42EP5Q6NZY7 148 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 HDAC11Q96DB2 347 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 TRIM56Q9BRZ2 755 aaKnown RBP19.92■□□□□ 0.78
CLIP2-201ENST00000223398 BARHL2Q9NY43 387 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 FLT1P17948 1338 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 TRIM49BA6NDI0 452 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 IKBKBO14920 756 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 HUS1O60921 280 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 CABS1Q96KC9 395 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 P4HBP07237 508 aaKnown RBP19.92■□□□□ 0.78
CLIP2-201ENST00000223398 SLC15A2Q16348 729 aa19.92■□□□□ 0.78
CLIP2-201ENST00000223398 CYP2B6P20813 491 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 ETF1P62495 437 aaKnown RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 CYP27A1Q02318 531 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 ZNF699Q32M78 642 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 TMED8Q6PL24 325 aaPredicted RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 TDRD7Q8NHU6 1098 aaKnown RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 PRPF31Q8WWY3 499 aaKnown RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 RAD54LQ92698 747 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 FAM20AQ96MK3 541 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 SOWAHDA6NJG2 315 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 NT5C2P49902 561 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 COG2Q14746 738 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms