RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 KNOP1Q1ED39 458 aaKnown RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 TUBB8Q3ZCM7 444 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 NLRP14Q86W24 1093 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 KSR1Q8IVT5 923 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 CTNNBL1Q8WYA6 563 aaPredicted RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 CCT8L2Q96SF2 557 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 RGL1Q9NZL6 768 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 STRCP1A6NGW2 1772 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 SPATA31A5Q5VU36 1347 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 SPATA31A7Q8IWB4 1347 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 PPP1R11O60927 126 aaPredicted RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 FGGP02679 453 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 ERVK-9P63128 1117 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 HDLBPQ00341 1268 aaKnown RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 CTTNQ14247 550 aaKnown RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 ASTE1Q2TB18 679 aaPredicted RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 METTL13Q8N6R0 699 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 REEP2Q9BRK0 252 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 GDF3Q9NR23 364 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 ABCB11O95342 1321 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 TTI1O43156 1089 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 LRRN2O75325 713 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 GDF11O95390 407 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 LCA5LO95447 670 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 SERPINB2P05120 415 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 NT5C2P49902 561 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 RUFY4Q6ZNE9 571 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 KIAA0825Q8IV33 1275 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 ZNF473Q8WTR7 871 aaKnown RBP12.19□□□□□ -0.46
NEFM-201ENST00000221166 PBKQ96KB5 322 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
NEFM-201ENST00000221166 NR3C1P04150 777 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 HSD17B3P37058 310 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 MDH1P40925 334 aaKnown RBP12.19□□□□□ -0.46
NEFM-201ENST00000221166 ARHGAP4P98171 946 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 CCDC25Q86WR0 208 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 EPN3Q9H201 632 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 DDX4Q9NQI0 724 aaKnown RBP12.19□□□□□ -0.46
NEFM-201ENST00000221166 NAGPAQ9UK23 515 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 ITGB4P16144 1822 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 HMGB1P1B2RPK0 211 aaPredicted RBP12.19□□□□□ -0.46
NEFM-201ENST00000221166 SMARCA1P28370 1054 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
NEFM-201ENST00000221166 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 SLFN12Q8IYM2 578 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 CEP89Q96ST8 783 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 TRIM51Q9BSJ1 452 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 IKZF4Q9H2S9 585 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 BCAS3Q9H6U6 928 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
NEFM-201ENST00000221166 CFBP00751 764 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 HS2ST1Q7LGA3 356 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 CEP57Q86XR8 500 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 IQCKQ8N0W5 287 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 RUBCNQ92622 972 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 SH3GL2Q99962 352 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 BZW2Q9Y6E2 419 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 CNTNAP4Q9C0A0 1308 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 GOLGA6L10A0A0M3HER8 536 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 PON1P27169 355 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 KCNA1Q09470 495 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 SYN2Q92777 582 aaPredicted RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
NEFM-201ENST00000221166 RABGAP1Q9Y3P9 1069 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 DDX60Q8IY21 1712 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 DDX39AO00148 427 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 AKAP3O75969 853 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 NMT1P30419 496 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 HNRNPH1P31943 449 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 PLTPP55058 493 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 MAGOHP61326 146 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 PTGISQ16647 500 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 COBLL1Q53SF7 1204 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
NEFM-201ENST00000221166 MAGOHBQ96A72 148 aaKnown RBP12.18□□□□□ -0.46
NEFM-201ENST00000221166 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 MEFVO15553 781 aaPredicted RBP12.17□□□□□ -0.46
NEFM-201ENST00000221166 USP11P51784 963 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 SHROOM1Q2M3G4 852 aaPredicted RBP12.17□□□□□ -0.46
NEFM-201ENST00000221166 INPP4AQ96PE3 977 aaPredicted RBP12.17□□□□□ -0.46
NEFM-201ENST00000221166 CTTNBP2NLQ9P2B4 639 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 TRIM49P0CI25 452 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 TRIM49CP0CI26 452 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 GALCP54803 685 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 ZC2HC1CQ53FD0 456 aaPredicted RBP12.17□□□□□ -0.46
NEFM-201ENST00000221166 KDM7AQ6ZMT4 941 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
NEFM-201ENST00000221166 SYCE1Q8N0S2 351 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms