RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 ADCK5Q3MIX3 580 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 SCN4BQ8IWT1 228 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 DHX38Q92620 1227 aaKnown RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 CHEK2O96017 543 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 ARHGDIAP52565 204 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 TSPY1Q01534 308 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 TRIM15Q9C019 465 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 COA1Q9GZY4 146 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 GINM1Q9NU53 330 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PCDHA6Q9UN73 950 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PCDHA8Q9Y5H6 950 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 LRRD1A4D1F6 860 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 HSPA8P11142 646 aaKnown RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 NFX1Q12986 1120 aaKnown RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 SLFN12LQ6IEE8 588 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 FRMD3A2A2Y4 597 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 SOWAHDA6NJG2 315 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 APOA5Q6Q788 366 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 NLRP10Q86W26 655 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 FSD1LQ9BXM9 530 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 AP1M1Q9BXS5 423 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PDE11AQ9HCR9 933 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PLEKHG1Q9ULL1 1385 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PRPF3O43395 683 aaKnown RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 TAC1P20366 129 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 NFKBIAP25963 317 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PSMD2Q13200 908 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 ZKSCAN8Q15776 578 aaPredicted RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 SUSD4Q5VX71 490 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PASD1Q8IV76 773 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 MAML1Q92585 1016 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PBKQ96KB5 322 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 GPR108Q9NPR9 543 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 SCHIP1Q9P0W5 487 aaPredicted RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 SEC31AO94979 1220 aaKnown RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 SLCO1A2P46721 670 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 STXBP2Q15833 593 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 FAM133BQ5BKY9 247 aaKnown RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PAGE5Q96GU1 130 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 PIH1D3Q9NQM4 214 aaKnown RBP11.93□□□□□ -0.5
KNOP1-201ENST00000219837 NPC1L1Q9UHC9 1359 aa11.93□□□□□ -0.5
KNOP1-201ENST00000219837 CACNB3P54284 484 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 CCDC197Q8NCU1 140 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 K7ERI5 159 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 CREB3O43889 395 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 MXD4Q14582 209 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 DCAF4L1Q3SXM0 396 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 PIGOQ8TEQ8 1089 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 FAF1Q9UNN5 650 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 JRKLQ9Y4A0 524 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 H3BRJ5 948 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 ALCAMQ13740 583 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 SEPT2Q15019 361 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 TRIM59Q8IWR1 403 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 GSDMAQ96QA5 445 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 ZNF302Q9NR11 478 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 CFLARO15519 480 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 RECQLP46063 649 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 PRELPP51888 382 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 GABPB1Q06547 395 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 ACCSLQ4AC99 568 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 SPATS2Q86XZ4 545 aaKnown RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 RRAGDQ9NQL2 400 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 USP17L5A8MUK1 530 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 PGRMC1O00264 195 aaKnown RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 GH2P01242 217 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 ATG16L1Q676U5 607 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 RHPN2Q8IUC4 686 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 ACRBPQ8NEB7 543 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 BSDC1Q9NW68 430 aaPredicted RBP11.92□□□□□ -0.5
KNOP1-201ENST00000219837 SUGT1Q9Y2Z0 365 aa11.92□□□□□ -0.5
KNOP1-201ENST00000219837 MXI1P50539 228 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 KCNA1Q09470 495 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 TWF2Q6IBS0 349 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 NCLNQ969V3 563 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 CCDC124Q96CT7 223 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 CCDC138Q96M89 665 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 INTUQ9ULD6 942 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 HMGB1P1B2RPK0 211 aaPredicted RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 NEMP1O14524 444 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 TRPA1O75762 1119 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 DR1Q01658 176 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 NR5A1Q13285 461 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 SLC39A14Q15043 492 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 ZSCAN26Q16670 478 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 THNSL1Q8IYQ7 743 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 WRNIP1Q96S55 665 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 ZHX2Q9Y6X8 837 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 LDHAP00338 332 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms