RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CRISPLD2Q9H0B8 497 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 TUT1Q9H6E5 874 aaKnown RBP30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 LMBRD1Q9NUN5 540 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 ATP4AP20648 1035 aa30.49■■■□□ 2.47
CHMP4B-201ENST00000217402 MTG1Q9BT17 334 aaPredicted RBP30.49■■■□□ 2.47
CHMP4B-201ENST00000217402 KCNH3Q9ULD8 1083 aa30.49■■■□□ 2.47
CHMP4B-201ENST00000217402 MCM4P33991 863 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 GJA8P48165 433 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 NDUFA8P51970 172 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 ACLYP53396 1101 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 TMEM119Q4V9L6 283 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 HYIQ5T013 277 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 C4orf19Q8IY42 314 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 PIGOQ8TEQ8 1089 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 NT5C3AQ9H0P0 336 aa30.48■■■□□ 2.47
CHMP4B-201ENST00000217402 TMEM150BA6NC51 233 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 DNM1LO00429 736 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 ZBTB39O15060 712 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 DKC1O60832 514 aaKnown RBP eCLIP30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 OATP04181 439 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 PSMC6P62333 389 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 KCNK18Q7Z418 384 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 PPP1R13LQ8WUF5 828 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 RNPEPQ9H4A4 650 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 TRPC6Q9Y210 931 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 WDR81Q562E7 1941 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 SLC26A4O43511 780 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 SLC26A2P50443 739 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 MFSD10Q14728 455 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 PLCB4Q15147 1175 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 KIAA0753Q2KHM9 967 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 RRAGBQ5VZM2 374 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 TSEN34Q9BSV6 310 aaKnown RBP30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 SEPT9Q9UHD8 586 aaPredicted RBP30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 HPSEQ9Y251 543 aa30.47■■■□□ 2.47
CHMP4B-201ENST00000217402 MOXD2PA6NHM9 499 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 DDX11L8A8MPP1 907 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 POLR2DO15514 142 aaKnown RBP30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 LYPLA2O95372 231 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 YWHABP31946 246 aaKnown RBP30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 PSEN2P49810 448 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 CCDC73Q6ZRK6 1079 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 LRRC15Q8TF66 581 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 DHX58Q96C10 678 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 KATNAL1Q9BW62 490 aa30.46■■■□□ 2.47
CHMP4B-201ENST00000217402 E9PMD0 336 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 MUTP22033 750 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 STAT6P42226 847 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 XKR3Q5GH77 459 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 PLA2G4FQ68DD2 849 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 ATP8B4Q8TF62 1192 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 NACC1Q96RE7 527 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 SH2D3AQ9BRG2 576 aa30.45■■■□□ 2.47
CHMP4B-201ENST00000217402 MYH9P35579 1960 aaKnown RBP30.45■■■□□ 2.46
CHMP4B-201ENST00000217402 FAM237AA0A1B0GTK4 181 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 STBD1O95210 358 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 ANO5Q75V66 913 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 VTI1AQ96AJ9 217 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 FAM167AQ96KS9 214 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 PHF24Q9UPV7 400 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 A0A1W2PQ45 241 aaPredicted RBP30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 A0A1W2PQY0 241 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 LIG1P18858 919 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 SYKP43405 635 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 DNM3Q9UQ16 869 aa30.44■■■□□ 2.46
CHMP4B-201ENST00000217402 HAS3O00219 553 aa30.43■■■□□ 2.46
CHMP4B-201ENST00000217402 BBXQ8WY36 941 aaPredicted RBP30.43■■■□□ 2.46
CHMP4B-201ENST00000217402 GLT1D1Q96MS3 346 aa30.43■■■□□ 2.46
CHMP4B-201ENST00000217402 CCDC43Q96MW1 224 aaKnown RBP30.43■■■□□ 2.46
CHMP4B-201ENST00000217402 NRBP2Q9NSY0 501 aa30.43■■■□□ 2.46
CHMP4B-201ENST00000217402 CABYRO75952 493 aa30.42■■■□□ 2.46
CHMP4B-201ENST00000217402 E2F4Q16254 413 aa30.42■■■□□ 2.46
CHMP4B-201ENST00000217402 NAALADL2Q58DX5 795 aa30.42■■■□□ 2.46
CHMP4B-201ENST00000217402 BLOC1S4Q9NUP1 217 aa30.42■■■□□ 2.46
CHMP4B-201ENST00000217402 MNX1P50219 401 aaPredicted RBP30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 NPEPPSP55786 919 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 FAM160A1Q05DH4 1040 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 MTERF2Q49AM1 385 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 XKR9Q5GH70 373 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 OTUD6AQ7L8S5 288 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 IQUBQ8NA54 791 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 RAD54LQ92698 747 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 BHMT2Q9H2M3 363 aa30.41■■■□□ 2.46
CHMP4B-201ENST00000217402 HBP1O60381 514 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 SSBP05455 408 aaKnown RBP eCLIP30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 DHX8Q14562 1220 aaKnown RBP30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 NBPF20Q3BBV1 942 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 DIS3LQ8TF46 1054 aaKnown RBP30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 STARD7Q9NQZ5 370 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 STK17AQ9UEE5 414 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 KIAA0100Q14667 2235 aaKnown RBP30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 NR1I2O75469 434 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 EYA4O95677 639 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 SMIM10L2AP0DMW4 78 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 SMIM10L2BP0DMW5 78 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 INSRRP14616 1297 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 IGBP1P78318 339 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 PPFIA1Q13136 1202 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 FMR1NBQ8N0W7 255 aaPredicted RBP30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 C7orf31Q8N865 590 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms