RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 TRAPPC3O43617 180 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 PLEKP08567 350 aaPredicted RBP11.21□□□□□ -0.61
CHERP-201ENST00000198939 RWDD2BP57060 319 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 PICALMQ13492 652 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 SLMAPQ14BN4 828 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 THAP9Q9H5L6 903 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 SAMD15Q9P1V8 674 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 L3MBTL1Q9Y468 752 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 SCN9AQ15858 1988 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 VIMP08670 466 aaKnown RBP11.21□□□□□ -0.61
CHERP-201ENST00000198939 GRIK3Q13003 919 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 BIRC3Q13489 604 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 CCDC6Q16204 474 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 CDC37Q16543 378 aaPredicted RBP11.21□□□□□ -0.61
CHERP-201ENST00000198939 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 LDHDQ86WU2 507 aa11.21□□□□□ -0.61
CHERP-201ENST00000198939 ADCY2Q08462 1091 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.62
CHERP-201ENST00000198939 C11orf91Q3C1V1 193 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 GNPTABQ3T906 1256 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 FAM133BQ5BKY9 247 aaKnown RBP11.21□□□□□ -0.62
CHERP-201ENST00000198939 TLDC1Q6P9B6 456 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 TMTC2Q8N394 836 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 CASKIN2Q8WXE0 1202 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 RAPGEF5Q92565 580 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.62
CHERP-201ENST00000198939 GDF3Q9NR23 364 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 ETAA1Q9NY74 926 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 LAMA4Q16363 1823 aa11.21□□□□□ -0.62
CHERP-201ENST00000198939 MGRN1O60291 552 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 CTNND1O60716 968 aaKnown RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 PRDM1O75626 825 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 CDC25CP30307 473 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 MAB21L3Q8N8X9 362 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 FANCBQ8NB91 859 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 CLRN2A0PK11 232 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 TCP10L2B9ZVM9 353 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 MAGOHP61326 146 aaKnown RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 ANGEL2Q5VTE6 544 aaKnown RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 RRAGAQ7L523 313 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 MAGOHBQ96A72 148 aaKnown RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 PLIN2Q99541 437 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 C15orf41Q9Y2V0 281 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 KLHL33A6NCF5 533 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 MARCH6O60337 910 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 AP1G2O75843 785 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 DNAJC8O75937 253 aaPredicted RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 MXRA7P84157 204 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 SPRED3Q2MJR0 410 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 FAM43BQ6ZT52 329 aaPredicted RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 PARD3BQ8TEW8 1205 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 PURBQ96QR8 312 aaKnown RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 FLT1P17948 1338 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 CCT8L1PA6NM43 557 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 BZW1Q7L1Q6 419 aaKnown RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 MREGQ8N565 214 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 GGA3Q9NZ52 723 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 PGAP2Q9UHJ9 254 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
CHERP-201ENST00000198939 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
CHERP-201ENST00000198939 BICDL2A1A5D9 508 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 EME2A4GXA9 379 aaPredicted RBP11.19□□□□□ -0.62
CHERP-201ENST00000198939 SNUPNO95149 360 aaKnown RBP11.19□□□□□ -0.62
CHERP-201ENST00000198939 FTCDO95954 541 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 YY1P25490 414 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 LACTBP83111 547 aaPredicted RBP11.19□□□□□ -0.62
CHERP-201ENST00000198939 LRIG3Q6UXM1 1119 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 ADSSL1Q8N142 457 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 ZNF507Q8TCN5 953 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 CHMP6Q96FZ7 201 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 HERC5Q9UII4 1024 aaKnown RBP11.19□□□□□ -0.62
CHERP-201ENST00000198939 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
CHERP-201ENST00000198939 WDR90Q96KV7 1748 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 SCN4AP35499 1836 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 MINDY4BA8MYZ0 360 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 HSD17B3P37058 310 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 UBA7P41226 1012 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 ICA1Q05084 483 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 EHHADHQ08426 723 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 IRF2BP1Q8IU81 584 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 SDR42E1Q8WUS8 393 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHERP-201ENST00000198939 MYH7P12883 1935 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 USP17L21D6R901 530 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 GHRP10912 638 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 NEFHP12036 1026 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 NLRP5P59047 1200 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 LACTB2Q53H82 288 aaPredicted RBP11.19□□□□□ -0.62
CHERP-201ENST00000198939 EMC10Q5UCC4 262 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 ZNF572Q7Z3I7 529 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms