RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 ZNF211Q13398 564 aaPredicted RBP10.92□□□□□ -0.66
CLDN18-201ENST00000183605 SPATA21Q7Z572 469 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 SEMA6BQ9H3T3 888 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 PCDHA4Q9UN74 947 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 PTPN22Q9Y2R2 807 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 CLSTN1O94985 981 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 MRPS35P82673 323 aaKnown RBP10.92□□□□□ -0.66
CLDN18-201ENST00000183605 CUL3Q13618 768 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 BLMHQ13867 455 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 B4GALNT2Q8NHY0 566 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 CTNNBL1Q8WYA6 563 aaPredicted RBP10.92□□□□□ -0.66
CLDN18-201ENST00000183605 TBK1Q9UHD2 729 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 AGAP1Q9UPQ3 857 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 ARL2BPQ9Y2Y0 163 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 AHCYL1O43865 530 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 ACSL3O95573 720 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 RCAN1P53805 252 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 NCALDP61601 193 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 NAALADL2Q58DX5 795 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 EMC10Q5UCC4 262 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 SNX29Q8TEQ0 813 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 GLG1Q92896 1179 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 TXLNGQ9NUQ3 528 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 KBTBD4Q9NVX7 518 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 SIK3Q9Y2K2 1263 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 KLRC4O43908 158 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 DDAH1O94760 285 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 C11orf91Q3C1V1 193 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 HERC4Q5GLZ8 1057 aaPredicted RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 TEX9Q8N6V9 391 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 ACSBG1Q96GR2 724 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 MAGEF1Q9HAY2 307 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 SEC63Q9UGP8 760 aaKnown RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 PNMA3Q9UL41 463 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 HEG1Q9ULI3 1381 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 DPPA5A6NC42 116 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 NKRFO15226 690 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 VEGFAP15692 232 aaPredicted RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 ATP5DP30049 168 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 HNRNPH3P31942 346 aaKnown RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 LRRC63Q05C16 580 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 ZNF268Q14587 947 aaPredicted RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 NONOQ15233 471 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 GRIPAP1Q4V328 841 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 ZC3H18Q86VM9 953 aaKnown RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 EPS8L3Q8TE67 593 aaKnown RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 STMN2Q93045 179 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 FGD4Q96M96 766 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 CCSER1Q9C0I3 900 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 DNAJC17Q9NVM6 304 aaKnown RBP10.91□□□□□ -0.66
CLDN18-201ENST00000183605 C2CD2Q9Y426 696 aa10.91□□□□□ -0.66
CLDN18-201ENST00000183605 RGPD1P0DJD0 1748 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 SMIM22K7EJ46 135 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 PFKFB3Q16875 520 aaPredicted RBP10.9□□□□□ -0.66
CLDN18-201ENST00000183605 MFN1Q8IWA4 741 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 ZBTB38Q8NAP3 1195 aaPredicted RBP10.9□□□□□ -0.66
CLDN18-201ENST00000183605 LARP4BQ92615 738 aaKnown RBP10.9□□□□□ -0.66
CLDN18-201ENST00000183605 LRRC27Q9C0I9 530 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 ARPP21Q9UBL0 812 aaPredicted RBP10.9□□□□□ -0.66
CLDN18-201ENST00000183605 AGTP01019 485 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 TGS1Q96RS0 853 aaKnown RBP10.9□□□□□ -0.66
CLDN18-201ENST00000183605 ORAI2Q96SN7 254 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 EDEM3Q9BZQ6 932 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 PABPC3Q9H361 631 aaKnown RBP10.9□□□□□ -0.66
CLDN18-201ENST00000183605 SLC5A4Q9NY91 659 aa10.9□□□□□ -0.66
CLDN18-201ENST00000183605 WNK3Q9BYP7 1800 aa10.9□□□□□ -0.67
CLDN18-201ENST00000183605 SNX3O60493 162 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 CTSWP56202 376 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 DYNLL1P63167 89 aaKnown RBP10.89□□□□□ -0.67
CLDN18-201ENST00000183605 ROR2Q01974 943 aaKnown RBP10.89□□□□□ -0.67
CLDN18-201ENST00000183605 ZBTB16Q05516 673 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 ADAM9Q13443 819 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 ZSCAN29Q8IWY8 852 aaPredicted RBP10.89□□□□□ -0.67
CLDN18-201ENST00000183605 DNAJC9Q8WXX5 260 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 MRRFQ96E11 262 aaKnown RBP10.89□□□□□ -0.67
CLDN18-201ENST00000183605 PITPNM3Q9BZ71 974 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 C6orf50Q9HD87 102 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 USH1CQ9Y6N9 552 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 TMEM120BA0PK00 339 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 RAD21O60216 631 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 LGR5O75473 907 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 PAEPP09466 180 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 GNAQP50148 359 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 RASSF2P50749 326 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 CACNB1Q02641 598 aaPredicted RBP10.89□□□□□ -0.67
CLDN18-201ENST00000183605 TROAPQ12815 778 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 RCN2Q14257 317 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 FAM26FQ5R3K3 315 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 FBXO25Q8TCJ0 367 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 BAP1Q92560 729 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 AK8Q96MA6 479 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 ASIC3Q9UHC3 531 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 SLC12A4Q9UP95 1085 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 PCDHGC5Q9Y5F6 944 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 TACC3Q9Y6A5 838 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 LAMA4Q16363 1823 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 H0YGN5 161 aa10.89□□□□□ -0.67
CLDN18-201ENST00000183605 SKIP12755 728 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms