RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.24
SYPL1-201ENST00000011473 TOX2Q96NM4 488 aa13.52□□□□□ -0.24
SYPL1-201ENST00000011473 PPP1R12CQ9BZL4 782 aa13.52□□□□□ -0.24
SYPL1-201ENST00000011473 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.24
SYPL1-201ENST00000011473 UMODL1Q5DID0 1318 aa13.52□□□□□ -0.24
SYPL1-201ENST00000011473 ALPK3Q96L96 1907 aa13.52□□□□□ -0.25
SYPL1-201ENST00000011473 SLITRK3O94933 977 aa13.52□□□□□ -0.25
SYPL1-201ENST00000011473 DNM1Q05193 864 aaKnown RBP13.52□□□□□ -0.25
SYPL1-201ENST00000011473 TMEM266Q2M3C6 531 aa13.52□□□□□ -0.25
SYPL1-201ENST00000011473 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
SYPL1-201ENST00000011473 SESTD1Q86VW0 696 aa13.52□□□□□ -0.25
SYPL1-201ENST00000011473 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.25
SYPL1-201ENST00000011473 ZBTB42B2RXF5 422 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 LAD1O00515 517 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 MED24O75448 989 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 OATP04181 439 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
SYPL1-201ENST00000011473 QARSP47897 775 aaKnown RBP13.51□□□□□ -0.25
SYPL1-201ENST00000011473 SLC26A2P50443 739 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■□□□□ 9.5
SYPL1-201ENST00000011473 PSMC5P62195 406 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 PLA2G4FQ68DD2 849 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 IGSF22Q8N9C0 903 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 LRWD1Q9UFC0 647 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 NRCAMQ92823 1304 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 TLR3O15455 904 aaKnown RBP13.51□□□□□ -0.25
SYPL1-201ENST00000011473 PDIA4P13667 645 aaKnown RBP13.51□□□□□ -0.25
SYPL1-201ENST00000011473 HOXC8P31273 242 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 PRPHP41219 470 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 ECM1Q16610 540 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 ANO5Q75V66 913 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 DHX38Q92620 1227 aaKnown RBP13.51□□□□□ -0.25
SYPL1-201ENST00000011473 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 TBX21Q9UL17 535 aa13.51□□□□□ -0.25
SYPL1-201ENST00000011473 H0YGN5 161 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 HBP1O60381 514 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 STBD1O95210 358 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 NPEPPSP55786 919 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 ADAM17P78536 824 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 PTPN11Q06124 597 aaPredicted RBP13.5□□□□□ -0.25
SYPL1-201ENST00000011473 ZRSR1Q15695 479 aaKnown RBP13.5□□□□□ -0.25
SYPL1-201ENST00000011473 SPECC1Q5M775 1068 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 RUFY4Q6ZNE9 571 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
SYPL1-201ENST00000011473 PIGOQ8TEQ8 1089 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
SYPL1-201ENST00000011473 CLIC6Q96NY7 704 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 HIPK3Q9H422 1215 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
SYPL1-201ENST00000011473 PRKAG2Q9UGJ0 569 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 CEP131Q9UPN4 1083 aa13.5□□□□□ -0.25
SYPL1-201ENST00000011473 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 CYP2C18P33260 490 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 CCL23P55773 120 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 MTERF2Q49AM1 385 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 ARL6IP4Q66PJ3 421 aaKnown RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 SNX29Q8TEQ0 813 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 RAG1P15918 1043 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 NCLP19338 710 aaKnown RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 NASPP49321 788 aaPredicted RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 STK38Q15208 465 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 XKR3Q5GH77 459 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 LINC00301Q8NCQ3 95 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 ZNF396Q96N95 335 aaPredicted RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 PLIN2Q99541 437 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 MMTAG2Q9BU76 263 aaKnown RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 FAM49AQ9H0Q0 323 aaPredicted RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 ZSWIM4Q9H7M6 989 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 FBXO2Q9UK22 296 aaPredicted RBP13.49□□□□□ -0.25
SYPL1-201ENST00000011473 NR2E3Q9Y5X4 410 aa13.49□□□□□ -0.25
SYPL1-201ENST00000011473 BMP15O95972 392 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 GNAT1P11488 350 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 KLRC1P26715 233 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 CCT6AP40227 531 aaKnown RBP13.48□□□□□ -0.25
SYPL1-201ENST00000011473 PDIA5Q14554 519 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 SLC39A14Q15043 492 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 USP49Q70CQ1 688 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 SERINC5Q86VE9 423 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 C4orf19Q8IY42 314 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 ERMNQ8TAM6 284 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 SCLYQ96I15 445 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 FAM167AQ96KS9 214 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 NOC4LQ9BVI4 516 aaKnown RBP13.48□□□□□ -0.25
SYPL1-201ENST00000011473 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 CSRNP2Q9H175 543 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 NRBP2Q9NSY0 501 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 MBLAC1A4D2B0 266 aaPredicted RBP13.48□□□□□ -0.25
SYPL1-201ENST00000011473 KIAA0355O15063 1070 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 CTSHP09668 335 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 RPA1P27694 616 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 THPOP40225 353 aa13.48□□□□□ -0.25
SYPL1-201ENST00000011473 TMEM62Q0P6H9 643 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms