RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 NAV1Q8NEY1 1877 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 RPS6KA4O75676 772 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 GNA14O95837 355 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 FAM107AO95990 144 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 EXOC3L4Q17RC7 722 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 ASPRV1Q53RT3 343 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 DAAM2Q86T65 1068 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 JPH2Q9BR39 696 aaPredicted RBP15.33■□□□□ 0.04
USH1C-201ENST00000005226 MXD3Q9BW11 206 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 OSGEPQ9NPF4 335 aa15.33■□□□□ 0.04
USH1C-201ENST00000005226 PGRMC1O00264 195 aaKnown RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 GFPT2O94808 682 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 FSBPO95073 299 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 POLD1P28340 1107 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 CYP4A11Q02928 519 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 P2RX7Q99572 595 aaKnown RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 DHX36Q9H2U1 1008 aaKnown RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 DDX20Q9UHI6 824 aaKnown RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 A6NNZ2 444 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 DDX3XO00571 662 aaKnown RBP eCLIP15.32■□□□□ 0.04
USH1C-201ENST00000005226 ZBTB48P10074 688 aaPredicted RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 MARSP56192 900 aaKnown RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 PRPF4BQ13523 1007 aaKnown RBP15.32■□□□□ 0.04
USH1C-201ENST00000005226 TUBB8Q3ZCM7 444 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 EMC10Q5UCC4 262 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 CATSPER3Q86XQ3 398 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 CABS1Q96KC9 395 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.32■□□□□ 0.04
USH1C-201ENST00000005226 MAST2Q6P0Q8 1798 aa15.32■□□□□ 0.04
USH1C-201ENST00000005226 GMNCA6NCL1 334 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 FAM196BA6NMK8 535 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 PHF20L1A8MW92 1017 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 AFPP02771 609 aaKnown RBP15.31■□□□□ 0.04
USH1C-201ENST00000005226 SLC12A3P55017 1021 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 MAGOHP61326 146 aaKnown RBP15.31■□□□□ 0.04
USH1C-201ENST00000005226 DHX9Q08211 1270 aaKnown RBP15.31■□□□□ 0.04
USH1C-201ENST00000005226 GIT2Q14161 759 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 KSR1Q8IVT5 923 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 CCDC13Q8IYE1 715 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 ACTRT1Q8TDG2 376 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 MAGOHBQ96A72 148 aaKnown RBP15.31■□□□□ 0.04
USH1C-201ENST00000005226 PBKQ96KB5 322 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 REEP2Q9BRK0 252 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 NT5C3AQ9H0P0 336 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 ABCB4P21439 1286 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 NOVP48745 357 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 GTF2IP78347 998 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 SEPT2Q15019 361 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 PRR16Q569H4 304 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 SLC12A6Q9UHW9 1150 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 BCS1LQ9Y276 419 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 DAGLAQ9Y4D2 1042 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 MYH7BA7E2Y1 1941 aa15.31■□□□□ 0.04
USH1C-201ENST00000005226 COL16A1Q07092 1604 aaPredicted RBP15.31■□□□□ 0.04
USH1C-201ENST00000005226 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 ZNF211Q13398 564 aaPredicted RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 RAPGEF5Q92565 580 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 DNM1LO00429 736 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 FGGP02679 453 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 H2AFZP0C0S5 128 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 NT5C2P49902 561 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 GALCP54803 685 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 ACTN3Q08043 901 aaPredicted RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 CUL1Q13616 776 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 EPHA7Q15375 998 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 KRT71Q3SY84 523 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 SWT1Q5T5J6 900 aaKnown RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 C6orf89Q6UWU4 347 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 H2AFVQ71UI9 128 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 OSBPL7Q9BZF2 842 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 SPATA31A5Q5VU36 1347 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 SPATA31A7Q8IWB4 1347 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 SMIM23A6NLE4 172 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 ZBTB5O15062 677 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 TTLL1O95922 423 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 KNOP1Q1ED39 458 aaKnown RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 HYIQ5T013 277 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 UBAP2Q5T6F2 1119 aaKnown RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 AADACL2Q6P093 401 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 NT5DC3Q86UY8 548 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 UHMK1Q8TAS1 419 aaKnown RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 LRRC45Q96CN5 670 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 GCNT4Q9P109 453 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 POLLQ9UGP5 575 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 PPP1R9AQ9ULJ8 1098 aa15.3■□□□□ 0.04
USH1C-201ENST00000005226 THRAP3Q9Y2W1 955 aaKnown RBP15.3■□□□□ 0.04
USH1C-201ENST00000005226 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 GOLGB1Q14789 3259 aaKnown RBP15.29■□□□□ 0.04
USH1C-201ENST00000005226 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms