RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Chp1P61022 195 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ogfod1Q3U0K8 545 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Gpr162Q3UN16 588 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Angel2Q8K1C0 544 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ipo7Q9EPL8 1038 aaKnown RBP28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Magea4F2Z493 315 aa28.35■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Kcna2P63141 499 aa28.35■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Znf827Q505G8 1078 aa28.35■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Nsun6Q7TS68 476 aa28.35■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Rwdd2aQ9D9S3 292 aa28.35■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Pdia4P08003 638 aaKnown RBP28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ano9P86044 747 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Taf1bP97358 586 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Etv6P97360 485 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 L1td1Q587J6 782 aaKnown RBP28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Spdye4aQ5IBH6 268 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Antxr2Q6DFX2 487 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Tlr13Q6R5N8 991 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Rusc1Q8BG26 893 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Bcas3Q8CCN5 928 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Fam83aQ8K2P2 436 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ttc8Q8VD72 515 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Fam217aQ9D9W6 419 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 FibpQ9JI19 357 aa28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Zc3h18Q0P678 948 aaKnown RBP28.34■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Dicer1Q8R418 1916 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Sbno2Q7TNB8 1349 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Nr1i3O35627 358 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Eps15P42567 897 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 EtnpplQ8BWU8 499 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Pnma1Q8C1C8 353 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 OtoaQ8K561 1137 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Nxf1Q99JX7 618 aaKnown RBP28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 IydQ9DCX8 285 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ercc4Q9QZD4 917 aa28.33■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Fam129cD3YZB0 591 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Kcnma1Q08460 1209 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Znf354cQ571J5 560 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Atp1a1Q8VDN2 1023 aaKnown RBP28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Ranbp17Q99NF8 1088 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 4931423N10RikQ9D4J9 382 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Apol6B7ZC55 329 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Per1O35973 1291 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Rad23aP54726 363 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Eif3j1Q3UGC7 261 aaKnown RBP28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 E2f8Q58FA4 860 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Entpd3Q8BFW6 529 aa28.32■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Cntnap2Q9CPW0 1332 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Mcl1P97287 331 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Rnf207Q3V3A7 635 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 MaeaQ4VC33 396 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Nxf2Q4ZGD8 691 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 WhrnQ80VW5 918 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Il31raQ8K5B1 716 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Slc14a1Q8VHL0 384 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Cdca7Q9D0M2 382 aa28.31■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Zfp213E9QAW0 468 aa28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Serpinb8O08800 374 aaKnown RBP28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 SpibO35906 267 aa28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 E2f7Q6S7F2 904 aa28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Maip1Q8BHE8 291 aa28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Mrgprx1Q8CIP3 322 aa28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Cdk17Q8K0D0 523 aa28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Cd2bp2Q9CWK3 342 aaKnown RBP28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Hebp1Q9R257 190 aa28.3■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Lcmt1A0A0U1RNF2 332 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Hnrnph3D3Z3N4 346 aaKnown RBP28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 B020004C17RikJ3QP07 232 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Kcnh2O35219 1162 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Gng11P61953 73 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 AlcamQ61490 583 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Sycp1Q62209 993 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Rab11fip4Q8BQP8 635 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Hsdl1Q8BTX9 330 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Disp2Q8CIP5 1345 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Agxt2Q3UEG6 513 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Gm10392Q3V3I3 114 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Zdhhc15Q8BGJ0 337 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Ipo5Q8BKC5 1097 aaKnown RBP28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 SucoQ8C341 1250 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Syne4Q8CII8 388 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 AagabQ8R2R3 316 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Pls3Q99K51 630 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Slfn14V9GXG1 899 aa28.29■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Col24a1Q30D77 1733 aa28.28■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Scgb2b11A0A087WR49 112 aa28.28■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Dhtkd1A2ATU0 921 aa28.28■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Pgrmc1O55022 195 aa28.28■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Cbx2P30658 519 aa28.28■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Klhl20Q8VCK5 604 aa28.28■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Klhdc7aA2APT9 773 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Gm28042B7ZCM9 1014 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Senp1P59110 640 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 CtifQ6PEE2 600 aaKnown RBP28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Gpr180Q8BPS4 441 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 IrgqQ8VIM9 583 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Plagl2Q925T4 496 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Galnt15Q9D2N8 638 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Ddx25Q9QY15 484 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Klra10Q9R1G6 266 aa28.27■■■□□ 2.12
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms