RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Hoxb3P09026 433 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 St3gal2Q11204 350 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Upf3aQ3ULJ3 422 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fdxacb1Q3UY23 622 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 4933427I04RikQ3V053 235 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gemin4Q6P6L6 1058 aaKnown RBP12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Cdca8Q8BHX3 289 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Prune1Q8BIW1 454 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Lrfn3Q8BLY3 626 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Bcas3Q8CCN5 928 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 FntbQ8K2I1 437 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Plcb4Q91UZ1 1175 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 TheglQ9DA15 459 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Plxna4Q80UG2 1893 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 MthfslL7N466 203 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fam49aQ8BHZ0 323 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Rbm12Q8R4X3 992 aaKnown RBP12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Tesk2Q8VCT9 570 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Tas1r3Q925D8 858 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gm28036V9GXJ1 658 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Barx2O08686 283 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fgf18O89101 207 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Erbb2P70424 1256 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Rplp2P99027 115 aaKnown RBP12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Tmem117Q8BH18 514 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gprc5aQ8BHL4 356 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Mtnr1bQ8CIQ6 364 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Top1mtQ8R4U6 593 aa12.4□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 DmpkP54265 631 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Actr2P61161 394 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Pald1P70261 859 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 DsppP97399 934 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ubxn10Q8BG34 277 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Zmynd15Q8C0R7 736 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Olfr397Q8VEZ6 315 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Unc80Q8BLN6 3261 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Arhgef10lA2AWP8 1280 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Cpb1B2RS76 415 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Il2rbP16297 539 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Jak2Q62120 1129 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Zbtb24Q80X44 710 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Pan2Q8BGF7 1200 aaKnown RBP12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 FtoQ8BGW1 502 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Gpr158Q8C419 1200 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Kbtbd4Q8R179 534 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Bbox1Q924Y0 387 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tlr6Q9EPW9 795 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Kcnh7Q9ER47 1195 aa12.39□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Rev3lQ61493 3122 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Col4a3Q9QZS0 1669 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ces1hD3Z298 562 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Cyp2b23E9Q593 491 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Svs3aF2Z472 265 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Itgb1P09055 798 aaKnown RBP12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tmc5Q32NZ6 967 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ogfod1Q3U0K8 545 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Kiaa1841Q68FF0 718 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Azin2Q8BVM4 459 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Triml1Q8BVP1 470 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Asb2Q8K0L0 634 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ascl3Q9JJR7 174 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Pcsk5Q04592 1877 aa12.38□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Trim30bE9PVL6 203 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 NrlP54846 237 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Adcyap1r1P70205 496 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Gse1Q3U3C9 1213 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tmem132dQ76HP3 1097 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Leng9Q8BTN6 485 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Polr3eQ9CZT4 710 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Mlh1Q9JK91 760 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Clec1bQ9JL99 229 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Krt17Q9QWL7 433 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Gpaa1Q9WTK3 621 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Pabpc1lA2A5N3 607 aaKnown RBP12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Maml3D4QGC2 1135 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Fam170bE9PXT9 378 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ntan1Q64311 310 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 SheQ8BSD5 492 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Q922R1 422 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Smc1aQ9CU62 1233 aaKnown RBP12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Cxxc1Q9CWW7 660 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 TbcbQ9D1E6 244 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Cnpy3Q9DAU1 276 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Rab27aQ9ERI2 221 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Psmd10Q9Z2X2 231 aa12.37□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 TazI7HJS2 263 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Fcgr2P08101 330 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Scp2P32020 547 aaKnown RBP12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Nt5c2Q3V1L4 560 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Meis1Q60954 390 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Fam214aQ69ZK7 1075 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Cep55Q8BT07 462 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Appl2Q8K3G9 662 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tceanc2Q8R2M0 207 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Spg21Q9CQC8 308 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 PycardQ9EPB4 193 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Bscl2Q9Z2E9 383 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Aox1O54754 1333 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tgfbr3lD3YZZ2 297 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Gm29094F6Q785 221 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms