RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Usp50Q6P8X6 390 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Dpp9Q8BVG4 862 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Prl7b1Q8CGZ9 251 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Trub2Q91WG3 331 aaKnown RBP12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Plagl2Q925T4 496 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Coro7Q9D2V7 922 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Mxra8Q9DBV4 442 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 MycbpQ9EQS3 103 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Col5a3Q9JLI2 1739 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Zmym2Q9CU65 1376 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Gm36210A0A1B0GS00 229 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Gm28042B7ZCM9 1014 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Rsph10bE9PYQ0 876 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 PpardP35396 440 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Cct5P80316 541 aaKnown RBP12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Lrsam1Q80ZI6 727 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Cep95Q8BVV7 827 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Cdan1Q8CC12 1239 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 SltmQ8CH25 1031 aaKnown RBP12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Tldc1Q8K0P3 455 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Defb15Q8R2I5 79 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Tesk2Q8VCT9 570 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Mis18aQ9CZJ6 204 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Tmod4Q9JLH8 345 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Nfu1Q9QZ23 255 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Scn3aA2ASI5 1947 aa12.29□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Foxn2E9Q7L6 429 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 PrkczQ02956 592 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Ppp1r7Q3UM45 361 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Foxn3Q499D0 457 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Tmem232Q5K6N0 675 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Dnph1Q80VJ3 173 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Krt79Q8VED5 531 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Erlin1Q91X78 346 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Mrpl11Q9CQF0 192 aaKnown RBP12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Slc39a2G3X943 309 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Folh1O35409 752 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 LdhbP16125 334 aaKnown RBP12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Epb41l4aP52963 686 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Slc12a2P55012 1205 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Senp1P59110 640 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 AcrbpQ3V140 540 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Asic1Q6NXK8 526 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Lrrc15Q80X72 579 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Zfp446Q8C9M8 523 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Slc18a1Q8R090 521 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Zkscan3Q91VW9 553 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Prpf6Q91YR7 941 aaKnown RBP12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 AvenQ9D9K3 342 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Tpcn1Q9EQJ0 817 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Map3k20Q9ESL4 802 aaKnown RBP12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Klra17Q9JMA4 273 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Ercc4Q9QZD4 917 aa12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Knop1Q9Z2Q2 478 aaKnown RBP12.28□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Pabpc1lA2A5N3 607 aaKnown RBP12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Map7d1A2AJI0 846 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Tmem132bF7BAB2 1078 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Rnaseh1O70338 285 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Fzd1O70421 642 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 SqleP52019 572 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Gm10392Q3V3I3 114 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Cd37Q61470 281 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Glra4Q61603 456 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Fam196bQ6GQV1 535 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Ubap2lQ80X50 1107 aaKnown RBP12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 GlyctkQ8QZY2 523 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Dis3Q9CSH3 958 aaKnown RBP12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Eid1Q9DCR4 169 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Prl2c5Q9JLV9 222 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Disp2Q8CIP5 1345 aa12.27□□□□□ -0.44
Ckap2-201ENSMUST00000046916 Gm9857F7CXR1 130 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 RaraP11416 462 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Tcp1P11983 556 aaKnown RBP12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 PtgdrP70263 357 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Aak1Q3UHJ0 959 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Tnni3kQ5GIG6 834 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Kcnj11Q61743 390 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Kctd3Q8BFX3 815 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Calhm4Q8CE93 315 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 H2-Q4Q8HWB2 354 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Cgref1Q8R1U2 281 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Srgap2Q91Z67 1071 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Gm5114W4VSN8 858 aa12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Obsl1D3YYU8 1804 aaKnown RBP12.27□□□□□ -0.45
Ckap2-201ENSMUST00000046916 C2cd2E9Q3C1 696 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Nfil3O08750 462 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 AoahO35298 574 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 NntQ61941 1086 aaKnown RBP12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Srrm3Q80WV7 648 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Zdhhc15Q8BGJ0 337 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Bpifb6Q8BU51 449 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Lrrc56Q8K375 552 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Bst2Q8R2Q8 172 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 TxlnbQ8VBT1 685 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Adcy3Q8VHH7 1145 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Nr3c2Q8VII8 978 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Serpinb3bQ9D1Q5 387 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Cep72Q9D3R3 646 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 4931423N10RikQ9D4J9 382 aa12.26□□□□□ -0.45
Ckap2-201ENSMUST00000046916 Capn10Q9ESK3 666 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms