RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ccdc194A0A140LIT1 234 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Gm11549A0A286YD83 63 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Sdccag3A2AIW0 432 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Gnl1P36916 607 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ankrd13cQ3UX43 541 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Npdc1Q64322 332 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Atg9aQ68FE2 551 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Pus7lQ8CE46 702 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Rtl9Q32KG4 1339 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Gm21083A0A0G2JFD5 256 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Zfp174B9EJW5 407 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Gm1758F6VZZ1 202 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Hmgb3O54879 200 aaKnown RBP11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Idh1O88844 414 aaKnown RBP11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Serpina1bP22599 413 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Q3TTJ4 293 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 HiraQ61666 1015 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Clca2Q8BG22 942 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Csgalnact2Q8C1F4 542 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 BaatQ91X34 420 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 MlklQ9D2Y4 472 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Rgs3Q9DC04 966 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Cog1Q9Z160 980 aa11.62□□□□□ -0.55
Ciita-201ENSMUST00000023147 Plekhg4A0A1L1SU27 1217 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Phldb3E9QAF4 648 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Xrcc6P23475 608 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Nlrp4fQ66X05 959 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Sec23ipQ6NZC7 998 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Tmem60Q8K174 133 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Tmem134Q8R0J4 195 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Dnajc17Q91WT4 303 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Trim66Q924W6 1242 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Atp6v0a1Q9Z1G4 839 aaKnown RBP11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Gm2237E9Q501 211 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Gm3591K7N6X2 186 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Wfs1P56695 890 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Map3k7Q62073 579 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Asnsd1Q8BFS9 627 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Fam102bQ8BQS4 339 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 ScgnQ91WD9 276 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Srgap2Q91Z67 1071 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Zbtb12Q9Z150 459 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Trim5E9PV98 497 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 AK157302I3ITR1 129 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Hspa2P17156 633 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 NficP70255 439 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Eya3P97480 510 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 CtcfQ61164 736 aaKnown RBP11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Mtmr10Q7TPM9 771 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Sp8Q8BMJ8 486 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 IarsQ8BU30 1262 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Q8K2W9 541 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Rassf9Q8K342 435 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Hip1Q8VD75 1029 aaKnown RBP11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Rrp15Q9CYX7 281 aaKnown RBP11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Snrnp35Q9D384 244 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Isca1Q9D924 129 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 MajinQ9D992 256 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Rhobtb1Q9DAK3 695 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 IdeQ9JHR7 1019 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ulk4Q3V129 1303 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Col15a1O35206 1367 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Sec24cG3X972 1096 aaKnown RBP11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Tmem132dQ76HP3 1097 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Dcaf5Q80T85 946 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 CcnyQ8BGU5 341 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Sept8Q8CHH9 429 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Serpinb10Q8K1K6 397 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Mmgt1Q8K273 131 aaKnown RBP11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Slc8a2Q8K596 921 aa11.61□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ugt1a6bK9J7B2 531 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Casp14O89094 257 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Impdh2P24547 514 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 1700013D24RikQ0P521 120 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Gpr162Q3UN16 588 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 UrgcpQ5NCI0 926 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ugt1a6Q64435 531 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ugt1a7cQ6ZQM8 531 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Actn1Q7TPR4 892 aaKnown RBP11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Znf467Q8JZL0 594 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Sdr42e1Q9D665 394 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Rtn3Q9ES97 964 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 1700017N19RikA0A087WPJ1 469 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 FscbA1EGX6 1074 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Apol11bE9PUZ0 337 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 EsrraO08580 422 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Zmym1Q3TJB1 983 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Zbtb8osQ505B7 168 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ccdc40Q8BI79 1192 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Slc25a24Q8BMD8 475 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 CnstQ8CBC4 711 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Orc3Q9JK30 715 aaKnown RBP11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ubxn8Q9QZ49 277 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Zbtb18Q9WUK6 522 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Ttc13A0A1L1SSC7 844 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 AgtP11859 477 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Fbxo11Q7TPD1 930 aaKnown RBP11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Bpifb6Q8BU51 449 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Q91WD4 421 aa11.6□□□□□ -0.55
Ciita-201ENSMUST00000023147 Dnajc14Q921R4 703 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms